The 2.0 version of rSNPBase

Variant report

Variant rs2720296
Chromosome Location chr12:50169070-50169071
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:50148200-50170000 Weak transcription Right Atrium heart
2 chr12:50158200-50170200 Weak transcription Brain Inferior Temporal Lobe brain
3 chr12:50158400-50170000 Weak transcription Esophagus oesophagus
4 chr12:50158400-50170200 Weak transcription A549 lung
5 chr12:50158400-50170200 Weak transcription K562 blood
6 chr12:50158800-50170200 Weak transcription Primary B cells from peripheral blood blood
7 chr12:50158800-50170400 Weak transcription Primary B cells from cord blood blood
8 chr12:50158800-50181600 Weak transcription Brain Hippocampus Middle brain
9 chr12:50159000-50170000 Weak transcription Brain Substantia Nigra brain
10 chr12:50159000-50170200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr12:50159000-50170400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr12:50159000-50170400 Weak transcription NH-A brain
13 chr12:50159000-50170400 Weak transcription Osteobl bone
14 chr12:50159000-50171800 Weak transcription Brain Anterior Caudate brain
15 chr12:50159200-50170000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr12:50159200-50170000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr12:50159200-50170200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr12:50159200-50170200 Weak transcription NHEK skin
19 chr12:50159200-50170400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr12:50159200-50170400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr12:50159200-50170400 Weak transcription Primary monocytes fromperipheralblood blood
22 chr12:50159200-50170600 Weak transcription HMEC breast
23 chr12:50159200-50172200 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr12:50159200-50177600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr12:50159400-50171800 Weak transcription Liver Liver
26 chr12:50159400-50178600 Weak transcription Right Ventricle heart
27 chr12:50159800-50170200 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr12:50159800-50172000 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr12:50160000-50170600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr12:50160000-50172000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr12:50160200-50169600 Weak transcription Fetal Thymus thymus
32 chr12:50160200-50169800 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr12:50160400-50170400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr12:50160600-50170000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr12:50160600-50183400 Weak transcription Primary T cells from cord blood blood
36 chr12:50160800-50170000 Weak transcription Fetal Muscle Leg muscle
37 chr12:50160800-50170400 Weak transcription Fetal Stomach stomach
38 chr12:50161400-50170000 Weak transcription Brain Cingulate Gyrus brain
39 chr12:50164000-50170000 Weak transcription Duodenum Mucosa Duodenum
40 chr12:50168200-50170000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015