Variant report
| Variant | rs2720298 |
|---|---|
| Chromosome Location | chr12:50189807-50189808 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:50170800-50191200 | Weak transcription | Brain Substantia Nigra | brain |
| 2 | chr12:50172400-50192600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 3 | chr12:50174400-50209600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 4 | chr12:50177800-50203400 | Weak transcription | Fetal Kidney | kidney |
| 5 | chr12:50178400-50194000 | Weak transcription | NH-A | brain |
| 6 | chr12:50178400-50195000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 7 | chr12:50178800-50191600 | Weak transcription | NHDF-Ad | bronchial |
| 8 | chr12:50179200-50213600 | Weak transcription | Hela-S3 | cervix |
| 9 | chr12:50179600-50195200 | Weak transcription | Fetal Brain Male | brain |
| 10 | chr12:50181600-50190400 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 11 | chr12:50181800-50190600 | Weak transcription | A549 | lung |
| 12 | chr12:50182000-50191400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 13 | chr12:50182000-50191800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 14 | chr12:50182200-50191200 | Weak transcription | Primary B cells from peripheral blood | blood |
| 15 | chr12:50182200-50191400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 16 | chr12:50182400-50191000 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 17 | chr12:50183000-50190400 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 18 | chr12:50183200-50197600 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 19 | chr12:50183200-50200600 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 20 | chr12:50183200-50201400 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 21 | chr12:50183200-50203400 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 22 | chr12:50183400-50190600 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 23 | chr12:50183400-50191600 | Strong transcription | HSMMtube | muscle |
| 24 | chr12:50183400-50193200 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 25 | chr12:50183400-50193400 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 26 | chr12:50183400-50193400 | Strong transcription | Adipose Nuclei | Adipose |
| 27 | chr12:50183400-50197600 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 28 | chr12:50183400-50200000 | Strong transcription | Brain Hippocampus Middle | brain |
| 29 | chr12:50183400-50200000 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 30 | chr12:50183400-50200200 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 31 | chr12:50183400-50200200 | Strong transcription | Stomach Smooth Muscle | stomach |
| 32 | chr12:50183400-50200600 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 33 | chr12:50183400-50200600 | Strong transcription | Fetal Brain Female | brain |
| 34 | chr12:50183400-50202200 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 35 | chr12:50183400-50202200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 36 | chr12:50183400-50202600 | Strong transcription | NHLF | lung |
| 37 | chr12:50183600-50190400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 38 | chr12:50183800-50190600 | Weak transcription | Colonic Mucosa | Colon |
| 39 | chr12:50183800-50199800 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 40 | chr12:50184000-50190400 | Weak transcription | Dnd41 | blood |
| 41 | chr12:50184000-50190600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 42 | chr12:50184000-50192800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 43 | chr12:50184400-50190600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 44 | chr12:50184400-50191200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 45 | chr12:50184400-50193000 | Strong transcription | Brain Cingulate Gyrus | brain |
| 46 | chr12:50184400-50200000 | Strong transcription | Lung | lung |
| 47 | chr12:50184400-50200000 | Strong transcription | Spleen | Spleen |
| 48 | chr12:50184400-50200200 | Strong transcription | Brain Germinal Matrix | brain |
| 49 | chr12:50184400-50203200 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 50 | chr12:50184600-50190400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
