The 2.0 version of rSNPBase

Variant report

Variant rs2727461
Chromosome Location chr7:129491963-129491964
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:129475000-129534800 Weak transcription Colonic Mucosa Colon
2 chr7:129477800-129495400 Weak transcription HepG2 liver
3 chr7:129477800-129498400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr7:129479200-129495600 Weak transcription Fetal Muscle Leg muscle
5 chr7:129479400-129493000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr7:129479400-129493200 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr7:129479400-129543600 Weak transcription Thymus Thymus
8 chr7:129479600-129492600 Weak transcription Placenta Placenta
9 chr7:129481200-129493000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr7:129481200-129493000 Weak transcription Fetal Lung lung
11 chr7:129481400-129499800 Weak transcription Stomach Smooth Muscle stomach
12 chr7:129481400-129510000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr7:129484000-129497000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr7:129484200-129495400 Weak transcription Fetal Stomach stomach
15 chr7:129484200-129498600 Weak transcription Brain Hippocampus Middle brain
16 chr7:129484200-129503000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr7:129485400-129498600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr7:129485400-129503800 Weak transcription Lung lung
19 chr7:129485600-129493200 Weak transcription Right Atrium heart
20 chr7:129485600-129493600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr7:129485600-129493600 Weak transcription Brain Inferior Temporal Lobe brain
22 chr7:129485600-129493600 Weak transcription Gastric stomach
23 chr7:129485600-129495400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr7:129485600-129495400 Weak transcription Fetal Thymus thymus
25 chr7:129485600-129496000 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr7:129485600-129502400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr7:129485800-129493200 Weak transcription Rectal Smooth Muscle rectum
28 chr7:129486000-129493400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr7:129486000-129493800 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr7:129486000-129495800 Weak transcription GM12878-XiMat blood
31 chr7:129486400-129492800 Weak transcription Adipose Nuclei Adipose
32 chr7:129486400-129502400 Weak transcription Esophagus oesophagus
33 chr7:129486400-129505400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr7:129486600-129493400 Weak transcription Primary hematopoietic stem cells blood
35 chr7:129486600-129493400 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr7:129486600-129493800 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr7:129486600-129501400 Weak transcription Right Ventricle heart
38 chr7:129486800-129492800 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr7:129486800-129492800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr7:129486800-129492800 Weak transcription A549 lung
41 chr7:129486800-129492800 Weak transcription NHLF lung
42 chr7:129486800-129493000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr7:129486800-129493000 Weak transcription Small Intestine intestine
44 chr7:129486800-129493200 Weak transcription Primary B cells from cord blood blood
45 chr7:129486800-129493200 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr7:129486800-129493200 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr7:129486800-129493600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr7:129486800-129493600 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr7:129486800-129499200 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr7:129487000-129492800 Weak transcription HMEC breast

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Last update: Aug 31, 2015