The 2.0 version of rSNPBase

Variant report

Variant rs2728727
Chromosome Location chrX:154008845-154008846
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chrX:153992200-154013600 Weak transcription Fetal Brain Male brain
2 chrX:153992200-154014400 Weak transcription Right Atrium heart
3 chrX:153993200-154010200 Strong transcription Primary hematopoietic stem cells short term culture blood
4 chrX:153993200-154010200 Strong transcription Placenta Placenta
5 chrX:153993200-154011600 Strong transcription Fetal Thymus thymus
6 chrX:153993200-154012200 Strong transcription Primary monocytes fromperipheralblood blood
7 chrX:153993200-154012200 Strong transcription Monocytes-CD14+_RO01746 blood
8 chrX:153993800-154011200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chrX:153995800-154023000 Weak transcription Psoas Muscle Psoas
10 chrX:153996000-154011400 Strong transcription Dnd41 blood
11 chrX:153998400-154011800 Weak transcription GM12878-XiMat blood
12 chrX:153999000-154011800 Strong transcription Primary neutrophils fromperipheralblood blood
13 chrX:154000600-154014000 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chrX:154001400-154010800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chrX:154002000-154010200 Strong transcription Spleen Spleen
16 chrX:154002200-154009400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chrX:154002200-154010200 Strong transcription Thymus Thymus
18 chrX:154002200-154010800 Strong transcription Brain Angular Gyrus brain
19 chrX:154002600-154010000 Strong transcription Stomach Smooth Muscle stomach
20 chrX:154003800-154009200 Weak transcription Colon Smooth Muscle Colon
21 chrX:154003800-154009400 Weak transcription Brain Substantia Nigra brain
22 chrX:154003800-154011200 Strong transcription HUES6 Cell Line embryonic stem cell
23 chrX:154003800-154012000 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chrX:154003800-154014000 Weak transcription Fetal Lung lung
25 chrX:154004200-154012000 Weak transcription Primary B cells from cord blood blood
26 chrX:154004200-154012600 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chrX:154004400-154009400 Weak transcription Fetal Heart heart
28 chrX:154004600-154009200 Weak transcription Brain Inferior Temporal Lobe brain
29 chrX:154004600-154011000 Weak transcription Ovary ovary
30 chrX:154004600-154012000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chrX:154004600-154032400 Weak transcription Small Intestine intestine
32 chrX:154004800-154009200 Weak transcription Colonic Mucosa Colon
33 chrX:154004800-154013400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chrX:154005000-154009800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chrX:154005000-154010600 Weak transcription NHLF lung
36 chrX:154005000-154011600 Strong transcription K562 blood
37 chrX:154005000-154013000 Weak transcription Gastric stomach
38 chrX:154005200-154014200 Weak transcription Placenta Amnion Placenta Amnion
39 chrX:154005400-154009000 Weak transcription Adipose Nuclei Adipose
40 chrX:154005400-154012200 Weak transcription HepG2 liver
41 chrX:154005400-154014000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chrX:154005400-154015000 Weak transcription NH-A brain
43 chrX:154005400-154027800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chrX:154005600-154010600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chrX:154005600-154010800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chrX:154005600-154011000 Weak transcription Cortex derived primary cultured neurospheres brain
47 chrX:154005600-154011800 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chrX:154005600-154011800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chrX:154005600-154012000 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chrX:154005600-154015000 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015