The 2.0 version of rSNPBase

Variant report

Variant rs2730655
Chromosome Location chr12:51513355-51513356
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51477400-51518200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr12:51477800-51518400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr12:51477800-51518400 Weak transcription Pancreas Pancrea
4 chr12:51477800-51550200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr12:51483800-51513400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr12:51484000-51519400 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr12:51488400-51526600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr12:51494400-51515600 Weak transcription Stomach Mucosa stomach
9 chr12:51494600-51518200 Weak transcription Esophagus oesophagus
10 chr12:51494800-51518400 Weak transcription Aorta Aorta
11 chr12:51496400-51523400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr12:51499800-51513400 Strong transcription Fetal Thymus thymus
13 chr12:51501000-51517400 Weak transcription Psoas Muscle Psoas
14 chr12:51501000-51521000 Weak transcription Rectal Smooth Muscle rectum
15 chr12:51501800-51518400 Weak transcription Spleen Spleen
16 chr12:51502200-51527200 Weak transcription Colonic Mucosa Colon
17 chr12:51502600-51518400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr12:51502800-51531800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr12:51503000-51518400 Weak transcription NHLF lung
20 chr12:51503200-51513400 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr12:51503200-51518600 Weak transcription Muscle Satellite Cultured Cells --
22 chr12:51503200-51560200 Weak transcription Right Ventricle heart
23 chr12:51503600-51532000 Weak transcription Brain Angular Gyrus brain
24 chr12:51504400-51518200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr12:51504400-51518400 Weak transcription Ovary ovary
26 chr12:51504800-51518200 Weak transcription Gastric stomach
27 chr12:51504800-51518600 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr12:51504800-51518600 Weak transcription Brain Substantia Nigra brain
29 chr12:51504800-51518800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr12:51504800-51563400 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr12:51505200-51518200 Weak transcription Lung lung
32 chr12:51507600-51519800 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr12:51507800-51532200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr12:51507800-51539800 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr12:51508000-51543000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr12:51508200-51518200 Weak transcription Left Ventricle heart
37 chr12:51508200-51518200 Weak transcription HUVEC blood vessel
38 chr12:51509200-51513400 Strong transcription Fetal Muscle Trunk muscle
39 chr12:51509600-51520800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr12:51509800-51518200 Weak transcription Brain Germinal Matrix brain
41 chr12:51509800-51518600 Weak transcription Colon Smooth Muscle Colon
42 chr12:51510000-51516800 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr12:51510200-51514000 Weak transcription Brain Inferior Temporal Lobe brain
44 chr12:51510200-51516400 Weak transcription Fetal Kidney kidney
45 chr12:51510200-51518000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr12:51510200-51518000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr12:51510200-51518200 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr12:51510200-51518400 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr12:51510200-51518400 Weak transcription Stomach Smooth Muscle stomach
50 chr12:51510200-51518600 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015