Variant report
| Variant | rs2769402 |
|---|---|
| Chromosome Location | chr10:117352961-117352962 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:39)
| rs_ID | r2[population] |
|---|---|
| rs10509992 | 0.80[EUR][1000 genomes] |
| rs11197319 | 0.80[EUR][1000 genomes] |
| rs11197320 | 0.80[EUR][1000 genomes] |
| rs11197321 | 0.80[EUR][1000 genomes] |
| rs11197322 | 0.80[EUR][1000 genomes] |
| rs11197323 | 0.80[EUR][1000 genomes] |
| rs11197324 | 0.80[EUR][1000 genomes] |
| rs11197325 | 0.80[EUR][1000 genomes] |
| rs12259533 | 0.80[EUR][1000 genomes] |
| rs12259535 | 0.80[EUR][1000 genomes] |
| rs2769388 | 0.81[EUR][1000 genomes] |
| rs2769391 | 0.81[EUR][1000 genomes] |
| rs2769392 | 0.81[EUR][1000 genomes] |
| rs2769393 | 0.80[AFR][1000 genomes];0.81[EUR][1000 genomes] |
| rs2769394 | 0.81[EUR][1000 genomes] |
| rs2769395 | 0.81[EUR][1000 genomes] |
| rs2769396 | 0.81[EUR][1000 genomes] |
| rs2769397 | 0.81[EUR][1000 genomes] |
| rs2769398 | 0.81[EUR][1000 genomes] |
| rs2769399 | 0.81[AMR][1000 genomes];0.82[EUR][1000 genomes] |
| rs2769400 | 0.81[EUR][1000 genomes] |
| rs2769401 | 0.81[EUR][1000 genomes] |
| rs2769403 | 0.81[EUR][1000 genomes] |
| rs2769405 | 0.81[EUR][1000 genomes] |
| rs2769406 | 0.81[EUR][1000 genomes] |
| rs2769408 | 0.81[EUR][1000 genomes] |
| rs2769409 | 0.81[EUR][1000 genomes] |
| rs2769412 | 0.81[EUR][1000 genomes] |
| rs2769413 | 0.81[EUR][1000 genomes] |
| rs2769416 | 0.81[EUR][1000 genomes] |
| rs2804197 | 0.81[EUR][1000 genomes] |
| rs2804198 | 0.81[EUR][1000 genomes] |
| rs2804200 | 0.81[EUR][1000 genomes] |
| rs2804202 | 0.82[EUR][1000 genomes] |
| rs2804204 | 0.81[EUR][1000 genomes] |
| rs2804206 | 0.81[EUR][1000 genomes] |
| rs2804212 | 0.81[EUR][1000 genomes] |
| rs2804213 | 0.80[EUR][1000 genomes] |
| rs2804214 | 0.81[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:117327800-117357200 | Weak transcription | Aorta | Aorta |
| 2 | chr10:117351800-117357200 | Weak transcription | Ovary | ovary |
