The 2.0 version of rSNPBase

Variant report

Variant rs2781660
Chromosome Location chr6:131891839-131891840
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131883400-131914000 Weak transcription Pancreas Pancrea
2 chr6:131883800-131896000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr6:131886800-131899400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr6:131887800-131910600 Weak transcription Small Intestine intestine
5 chr6:131888200-131903400 Weak transcription Fetal Stomach stomach
6 chr6:131888200-131908800 Weak transcription Brain Angular Gyrus brain
7 chr6:131888400-131895600 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr6:131888400-131897800 Weak transcription Fetal Muscle Trunk muscle
9 chr6:131888400-131902000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr6:131888400-131902200 Weak transcription GM12878-XiMat blood
11 chr6:131888600-131900000 Weak transcription Left Ventricle heart
12 chr6:131888600-131905800 Weak transcription Aorta Aorta
13 chr6:131888800-131894000 Weak transcription Primary B cells from cord blood blood
14 chr6:131889000-131894400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr6:131889600-131897000 Weak transcription Fetal Intestine Large intestine
16 chr6:131889600-131898000 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr6:131889600-131898400 Weak transcription Fetal Lung lung
18 chr6:131889600-131900000 Weak transcription Ovary ovary
19 chr6:131889600-131902200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr6:131889600-131923200 Weak transcription Esophagus oesophagus
21 chr6:131890200-131892600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr6:131890200-131894200 Weak transcription Primary hematopoietic stem cells blood
23 chr6:131890200-131900200 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr6:131890200-131902200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr6:131890400-131894400 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr6:131890400-131901200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr6:131890600-131894000 Weak transcription Primary T cells fromperipheralblood blood
28 chr6:131890600-131895600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr6:131890600-131909600 Weak transcription Psoas Muscle Psoas
30 chr6:131890800-131900400 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr6:131890800-131908000 Weak transcription Colon Smooth Muscle Colon
32 chr6:131890800-131910600 Weak transcription Brain Substantia Nigra brain
33 chr6:131891000-131892200 Strong transcription Primary T cells from cord blood blood
34 chr6:131891200-131896400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr6:131891200-131897000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr6:131891600-131892000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr6:131891600-131892000 Enhancers Primary neutrophils fromperipheralblood blood
38 chr6:131891600-131892000 Enhancers HepG2 liver
39 chr6:131891600-131892200 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr6:131891600-131895400 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr6:131891600-131896400 Weak transcription Adipose Nuclei Adipose
42 chr6:131891800-131893400 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015