The 2.0 version of rSNPBase

Variant report

Variant rs2795368
Chromosome Location chr9:100045854-100045855
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100025800-100050200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr9:100035000-100059600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr9:100036800-100052200 Weak transcription Stomach Mucosa stomach
4 chr9:100037200-100050200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr9:100037400-100047000 Strong transcription Fetal Muscle Trunk muscle
6 chr9:100037800-100046600 Strong transcription Stomach Smooth Muscle stomach
7 chr9:100038200-100050600 Weak transcription Esophagus oesophagus
8 chr9:100038600-100046800 Strong transcription Brain Anterior Caudate brain
9 chr9:100038600-100047600 Weak transcription HepG2 liver
10 chr9:100038800-100046400 Strong transcription Ovary ovary
11 chr9:100038800-100047200 Strong transcription Liver Liver
12 chr9:100038800-100050400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr9:100039000-100046400 Strong transcription Fetal Muscle Leg muscle
14 chr9:100039000-100047000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr9:100039000-100047000 Strong transcription Skeletal Muscle Male skeletal muscle
16 chr9:100039000-100050600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr9:100039000-100052800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr9:100039000-100053000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr9:100039000-100054200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr9:100039200-100052800 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr9:100039200-100056400 Weak transcription Small Intestine intestine
22 chr9:100039400-100046400 Strong transcription Left Ventricle heart
23 chr9:100039400-100046600 Strong transcription Duodenum Smooth Muscle Duodenum
24 chr9:100039400-100046800 Strong transcription Primary T cells from cord blood blood
25 chr9:100039600-100046400 Strong transcription Skeletal Muscle Female skeletal muscle
26 chr9:100039600-100046600 Strong transcription Primary hematopoietic stem cells blood
27 chr9:100039600-100047200 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr9:100039600-100047400 Strong transcription Adipose Nuclei Adipose
29 chr9:100039600-100055000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr9:100039600-100055600 Weak transcription NH-A brain
31 chr9:100039800-100046200 Strong transcription HUES6 Cell Line embryonic stem cell
32 chr9:100039800-100046800 Strong transcription Dnd41 blood
33 chr9:100039800-100047200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr9:100039800-100047200 Weak transcription Pancreatic Islets Pancreatic Islet
35 chr9:100039800-100048000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr9:100039800-100050400 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr9:100039800-100051800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr9:100039800-100055600 Weak transcription NHLF lung
39 chr9:100040200-100046800 Strong transcription H1 Cell Line embryonic stem cell
40 chr9:100040200-100046800 Strong transcription iPS-20b Cell Line embryonic stem cell
41 chr9:100040400-100046400 Strong transcription Brain Inferior Temporal Lobe brain
42 chr9:100040600-100047000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr9:100040800-100055600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr9:100041000-100050400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr9:100041200-100050600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr9:100041400-100047200 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr9:100041400-100059600 Weak transcription Fetal Brain Male brain
48 chr9:100041600-100050000 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr9:100041600-100052800 Weak transcription Placenta Amnion Placenta Amnion
50 chr9:100041800-100047600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015