The 2.0 version of rSNPBase

Variant report

Variant rs2797620
Chromosome Location chr1:95441292-95441293
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95422000-95450800 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr1:95429000-95467600 Weak transcription Stomach Smooth Muscle stomach
3 chr1:95436600-95445200 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:95436600-95451200 Weak transcription Small Intestine intestine
5 chr1:95436800-95448600 Weak transcription Brain Angular Gyrus brain
6 chr1:95437400-95442000 Weak transcription Fetal Heart heart
7 chr1:95437600-95455600 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:95437800-95445400 Weak transcription Right Atrium heart
9 chr1:95437800-95455000 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr1:95437800-95458400 Weak transcription Liver Liver
11 chr1:95438000-95445400 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr1:95438000-95445400 Weak transcription Left Ventricle heart
13 chr1:95438200-95445800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:95439400-95445800 Weak transcription Fetal Stomach stomach
15 chr1:95439400-95446000 Weak transcription Primary T cells from cord blood blood
16 chr1:95439600-95448600 Weak transcription Right Ventricle heart
17 chr1:95440200-95450600 Weak transcription Colon Smooth Muscle Colon
18 chr1:95440400-95447800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:95440600-95441400 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:95440800-95442000 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr1:95440800-95445200 Weak transcription Fetal Muscle Leg muscle
22 chr1:95440800-95445400 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr1:95440800-95445400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:95440800-95447200 Weak transcription Adipose Nuclei Adipose
25 chr1:95440800-95448800 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:95441000-95445400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:95441000-95445600 Weak transcription NHLF lung
28 chr1:95441000-95445800 Weak transcription HMEC breast
29 chr1:95441000-95446000 Weak transcription NH-A brain
30 chr1:95441200-95445000 Weak transcription Muscle Satellite Cultured Cells --
31 chr1:95441200-95445200 Weak transcription HSMMtube muscle
32 chr1:95441200-95445200 Weak transcription Osteobl bone
33 chr1:95441200-95445400 Weak transcription HSMM muscle
34 chr1:95441200-95445600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:95441200-95445800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:95441200-95445800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:95441200-95445800 Weak transcription NHDF-Ad bronchial
38 chr1:95441200-95446000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015