Variant report
| Variant | rs2798354 |
|---|---|
| Chromosome Location | chr1:47651615-47651616 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:47646200-47652200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 2 | chr1:47646400-47653200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 3 | chr1:47646600-47652000 | Weak transcription | Pancreas | Pancrea |
| 4 | chr1:47647200-47653000 | Weak transcription | Colonic Mucosa | Colon |
| 5 | chr1:47647200-47655200 | Weak transcription | Right Atrium | heart |
| 6 | chr1:47648600-47652000 | Weak transcription | Esophagus | oesophagus |
| 7 | chr1:47649600-47652200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 8 | chr1:47649800-47652000 | Weak transcription | Fetal Intestine Small | intestine |
| 9 | chr1:47650000-47652400 | Weak transcription | Stomach Mucosa | stomach |
| 10 | chr1:47650000-47653200 | Weak transcription | K562 | blood |
| 11 | chr1:47650000-47655400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 12 | chr1:47650000-47655400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 13 | chr1:47650200-47655000 | Weak transcription | A549 | lung |
| 14 | chr1:47650600-47652200 | Weak transcription | Gastric | stomach |
| 15 | chr1:47650600-47655000 | Weak transcription | Lung | lung |
| 16 | chr1:47650600-47655400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 17 | chr1:47650800-47653000 | Enhancers | HepG2 | liver |
| 18 | chr1:47651000-47653600 | Enhancers | Fetal Intestine Large | intestine |
| 19 | chr1:47651400-47652200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 20 | chr1:47651600-47653200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
