Variant report

Variant rs2799513
Chromosome Location chr1:92349356-92349357
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92338600-92349600 Weak transcription Pancreas Pancrea
2 chr1:92338600-92350000 Weak transcription Esophagus oesophagus
3 chr1:92338600-92350000 Weak transcription Left Ventricle heart
4 chr1:92338800-92350000 Weak transcription K562 blood
5 chr1:92344600-92349400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:92344600-92349800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:92346400-92352400 Active TSS Ovary ovary
8 chr1:92347000-92350000 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr1:92347000-92350000 Weak transcription GM12878-XiMat blood
10 chr1:92347400-92349400 Weak transcription Brain Anterior Caudate brain
11 chr1:92347400-92350000 Weak transcription Brain Cingulate Gyrus brain
12 chr1:92347400-92350200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr1:92348400-92349800 Enhancers Fetal Heart heart
14 chr1:92348400-92350000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr1:92348600-92349400 Enhancers Brain Hippocampus Middle brain
16 chr1:92348600-92350000 Weak transcription Brain Angular Gyrus brain
17 chr1:92348600-92350000 Active TSS Rectal Mucosa Donor 29 rectum
18 chr1:92348600-92350000 Enhancers HUVEC blood vessel
19 chr1:92348600-92350000 Enhancers Osteobl bone
20 chr1:92348600-92351800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:92348600-92352200 Active TSS Psoas Muscle Psoas
22 chr1:92348600-92352200 Active TSS NHLF lung
23 chr1:92348600-92352400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:92348600-92352400 Active TSS Right Atrium heart
25 chr1:92348800-92349400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:92348800-92349600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:92348800-92349600 Flanking Active TSS Fetal Stomach stomach
28 chr1:92348800-92349600 Flanking Active TSS A549 lung
29 chr1:92348800-92349600 Flanking Active TSS Hela-S3 cervix
30 chr1:92348800-92350000 Enhancers Primary T helper 17 cells PMA-I stimulated --
31 chr1:92348800-92350000 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr1:92348800-92350000 Enhancers Skeletal Muscle Female skeletal muscle
33 chr1:92348800-92352200 Active TSS NHDF-Ad bronchial
34 chr1:92349000-92349400 Active TSS Primary T cells fromperipheralblood blood
35 chr1:92349000-92349400 Enhancers Primary T helper cells fromperipheralblood blood
36 chr1:92349000-92349400 Enhancers Primary mononuclear cells fromperipheralblood Blood
37 chr1:92349000-92349400 Flanking Active TSS Colon Smooth Muscle Colon
38 chr1:92349000-92349600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
39 chr1:92349000-92349600 Flanking Active TSS Liver Liver
40 chr1:92349000-92349600 Active TSS Fetal Muscle Trunk muscle
41 chr1:92349000-92349800 Flanking Active TSS Fetal Muscle Leg muscle
42 chr1:92349000-92350000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:92349000-92350000 Enhancers Duodenum Mucosa Duodenum
44 chr1:92349000-92350000 Active TSS Rectal Mucosa Donor 31 rectum
45 chr1:92349000-92350200 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr1:92349000-92350400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
47 chr1:92349000-92351000 Active TSS Right Ventricle heart
48 chr1:92349000-92351200 Active TSS Duodenum Smooth Muscle Duodenum
49 chr1:92349000-92351200 Bivalent/Poised TSS HepG2 liver
50 chr1:92349000-92351600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin

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