Variant report

Variant rs2800284
Chromosome Location chr9:103338012-103338013
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:103261600-103340200 Weak transcription Left Ventricle heart
2 chr9:103307400-103341800 Strong transcription HUES48 Cell Line embryonic stem cell
3 chr9:103307400-103347800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr9:103308000-103340200 Weak transcription Fetal Muscle Trunk muscle
5 chr9:103308600-103345400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr9:103311800-103342400 Weak transcription Primary hematopoietic stem cells blood
7 chr9:103313200-103340800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr9:103318400-103342400 Weak transcription Brain Anterior Caudate brain
9 chr9:103318600-103344000 Weak transcription Brain Cingulate Gyrus brain
10 chr9:103322400-103340400 Weak transcription Brain Substantia Nigra brain
11 chr9:103322600-103341800 Strong transcription iPS-20b Cell Line embryonic stem cell
12 chr9:103323000-103340200 Weak transcription Brain Hippocampus Middle brain
13 chr9:103323400-103342000 Weak transcription Brain Angular Gyrus brain
14 chr9:103323800-103340600 Weak transcription Brain Inferior Temporal Lobe brain
15 chr9:103324000-103340200 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr9:103324800-103345400 Weak transcription H9 Cell Line embryonic stem cell
17 chr9:103327800-103349400 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr9:103329600-103360800 Weak transcription Aorta Aorta
19 chr9:103329800-103351800 Weak transcription Ovary ovary
20 chr9:103330000-103357800 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr9:103330400-103345400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr9:103330400-103351600 Weak transcription Fetal Stomach stomach
23 chr9:103330800-103349400 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr9:103331600-103360200 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr9:103332400-103351600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr9:103332400-103357600 Weak transcription Fetal Lung lung
27 chr9:103333600-103360800 Weak transcription Fetal Brain Male brain
28 chr9:103334200-103338200 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr9:103334200-103341200 Strong transcription HUES6 Cell Line embryonic stem cell
30 chr9:103334200-103351000 Strong transcription HUES64 Cell Line embryonic stem cell
31 chr9:103334600-103350600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr9:103334800-103350200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr9:103335000-103338600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr9:103335000-103351000 Strong transcription iPS-18 Cell Line embryonic stem cell
35 chr9:103335400-103341400 Strong transcription H1 Cell Line embryonic stem cell
36 chr9:103335600-103341200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr9:103336000-103339000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr9:103336400-103340200 Enhancers HSMM muscle
39 chr9:103336600-103338400 Strong transcription Fetal Brain Female brain
40 chr9:103336800-103338600 Enhancers Fetal Muscle Leg muscle
41 chr9:103336800-103347800 Weak transcription Brain Germinal Matrix brain
42 chr9:103337000-103338800 Enhancers Osteobl bone
43 chr9:103337200-103338600 Enhancers NH-A brain
44 chr9:103337200-103338800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
45 chr9:103337400-103338200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr9:103337400-103338600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr9:103337400-103342800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr9:103337600-103338600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr9:103337600-103338600 Enhancers NHEK skin
50 chr9:103337600-103338800 Enhancers Fetal Heart heart

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