The 2.0 version of rSNPBase

Variant report

Variant rs2804093
Chromosome Location chr13:48891508-48891509
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48879400-48894200 Weak transcription A549 lung
2 chr13:48879800-48892400 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr13:48880000-48892000 Weak transcription HSMMtube muscle
4 chr13:48880200-48892200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr13:48880200-48892200 Weak transcription Fetal Kidney kidney
6 chr13:48880200-48892200 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr13:48880200-48892600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr13:48880200-48892600 Weak transcription NH-A brain
9 chr13:48880200-48893800 Weak transcription Brain Inferior Temporal Lobe brain
10 chr13:48880200-48894400 Weak transcription Brain Anterior Caudate brain
11 chr13:48880200-48913200 Weak transcription Aorta Aorta
12 chr13:48880400-48892400 Weak transcription HMEC breast
13 chr13:48880400-48892600 Weak transcription Primary hematopoietic stem cells blood
14 chr13:48880600-48891800 Weak transcription HUVEC blood vessel
15 chr13:48880600-48892200 Weak transcription Brain Hippocampus Middle brain
16 chr13:48880600-48892200 Weak transcription Rectal Smooth Muscle rectum
17 chr13:48880600-48892400 Weak transcription Ovary ovary
18 chr13:48880600-48894600 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr13:48880600-48924600 Weak transcription Psoas Muscle Psoas
20 chr13:48880800-48892200 Weak transcription Colon Smooth Muscle Colon
21 chr13:48880800-48892400 Weak transcription Primary T cells from cord blood blood
22 chr13:48880800-48893200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr13:48880800-48895200 Weak transcription Small Intestine intestine
24 chr13:48880800-48895600 Weak transcription Hela-S3 cervix
25 chr13:48880800-48896200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr13:48881200-48892800 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr13:48881200-48895600 Weak transcription HepG2 liver
28 chr13:48882400-48892200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr13:48883000-48892400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr13:48883800-48891800 Weak transcription Osteobl bone
31 chr13:48884200-48892600 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr13:48884400-48893400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr13:48884600-48892600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr13:48884600-48892800 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr13:48884800-48893000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr13:48885400-48892200 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr13:48885800-48892000 Weak transcription HSMM muscle
38 chr13:48886600-48892800 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr13:48887000-48896200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr13:48887200-48891600 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr13:48887200-48892000 Weak transcription Fetal Heart heart
42 chr13:48887600-48892200 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr13:48887800-48892000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr13:48887800-48892800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr13:48888800-48892400 Weak transcription Brain Substantia Nigra brain
46 chr13:48889400-48892000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr13:48889600-48891600 Strong transcription Primary B cells from peripheral blood blood
48 chr13:48889600-48892800 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr13:48889800-48892200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
50 chr13:48890000-48892000 ZNF genes & repeats Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015