The 2.0 version of rSNPBase

Variant report

Variant rs280928
Chromosome Location chr13:30152689-30152690
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30126000-30161400 Weak transcription Primary B cells from cord blood blood
2 chr13:30127600-30156400 Weak transcription Lung lung
3 chr13:30128000-30163600 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr13:30128600-30161800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr13:30128800-30155800 Weak transcription Primary T cells fromperipheralblood blood
6 chr13:30128800-30168200 Weak transcription Primary T cells from cord blood blood
7 chr13:30138600-30154000 Weak transcription H9 Cell Line embryonic stem cell
8 chr13:30138800-30155800 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr13:30138800-30159800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr13:30144400-30155600 Weak transcription HMEC breast
11 chr13:30144600-30154000 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr13:30144800-30154000 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr13:30146000-30154000 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr13:30146400-30154000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr13:30146400-30155400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr13:30146800-30154000 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr13:30147000-30154200 Weak transcription Hela-S3 cervix
18 chr13:30147200-30163200 Weak transcription Fetal Intestine Small intestine
19 chr13:30147600-30155400 Weak transcription Fetal Brain Male brain
20 chr13:30147800-30152800 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr13:30147800-30153000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr13:30147800-30155200 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr13:30147800-30155600 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr13:30147800-30163600 Weak transcription Thymus Thymus
25 chr13:30148200-30155600 Weak transcription Ovary ovary
26 chr13:30148200-30156400 Weak transcription Stomach Mucosa stomach
27 chr13:30148200-30156600 Weak transcription A549 lung
28 chr13:30148200-30156800 Weak transcription NHLF lung
29 chr13:30148400-30155800 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr13:30148400-30160400 Weak transcription Primary hematopoietic stem cells blood
31 chr13:30148400-30167400 Weak transcription Primary B cells from peripheral blood blood
32 chr13:30148600-30152800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr13:30148600-30154000 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr13:30148600-30154600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr13:30148600-30155600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr13:30148600-30156000 Weak transcription Small Intestine intestine
37 chr13:30148600-30160800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr13:30148800-30154000 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr13:30148800-30157400 Weak transcription GM12878-XiMat blood
40 chr13:30149200-30155600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr13:30149800-30152800 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr13:30149800-30154600 Enhancers Pancreas Pancrea
43 chr13:30150000-30154800 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr13:30150600-30153200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr13:30150600-30154200 Enhancers Fetal Muscle Leg muscle
46 chr13:30150800-30152800 Enhancers Brain Hippocampus Middle brain
47 chr13:30150800-30153800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr13:30150800-30154000 Enhancers Breast Myoepithelial Primary Cells Breast
49 chr13:30150800-30154600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
50 chr13:30150800-30154600 Enhancers Left Ventricle heart

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Last update: Aug 31, 2015