Variant report

Variant	rs28362372
Chromosome Location	chr2:10588422-10588423
allele	-/GCC
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr2:10587465-10588665	GM12878	blood:	n/a	n/a
2	MEF2C	chr2:10588003-10588508	GM12878	blood:	n/a	n/a
3	TFAP2C	chr2:10587934-10589495	Hela-S3	cervix:	n/a	chr2:10588258-10588273
4	POLR2A	chr2:10587534-10589505	GM12878	blood:	n/a	n/a
5	POLR2A	chr2:10587336-10588652	GM12892	blood:	n/a	n/a
6	TCF3	chr2:10588136-10588546	GM12878	blood:	n/a	n/a
7	E2F4	chr2:10587924-10589264	K562	blood:	n/a	chr2:10588665-10588674 chr2:10587961-10587970 chr2:10588257-10588267 chr2:10588788-10588797
8	REST	chr2:10588064-10588641	SK-N-SH	brain:	n/a	chr2:10588289-10588302
9	EGR1	chr2:10588067-10589379	K562	blood:	n/a	chr2:10589119-10589129 chr2:10589119-10589128 chr2:10589119-10589129 chr2:10589117-10589132 chr2:10589110-10589123 chr2:10589118-10589131 chr2:10588664-10588674 chr2:10589118-10589131 chr2:10589118-10589131 chr2:10588787-10588796 chr2:10589117-10589131 chr2:10589260-10589273 chr2:10588788-10588797
10	TAF1	chr2:10587912-10589336	HepG2	liver:	n/a	n/a
11	HEY1	chr2:10587866-10588630	HepG2	liver:	n/a	chr2:10587924-10587939 chr2:10587890-10587905 chr2:10587958-10587973
12	GTF2F1	chr2:10587714-10589279	H1-hESC	embryonic stem cell:	n/a	n/a
13	TAF1	chr2:10588331-10588579	GM12878	blood:	n/a	n/a
14	POLR2A	chr2:10588331-10588563	HepG2	liver:	n/a	n/a
15	CEBPD	chr2:10588158-10589145	HepG2	liver:	n/a	n/a
16	EGR1	chr2:10588168-10588808	ECC-1	luminal epithelium:	n/a	chr2:10588664-10588674 chr2:10588787-10588796 chr2:10588788-10588797
17	E2F6	chr2:10587867-10589406	Hela-S3	cervix:	n/a	chr2:10588665-10588674 chr2:10587961-10587970 chr2:10588257-10588267 chr2:10588788-10588797
18	TAF1	chr2:10588129-10588701	K562	blood:	n/a	n/a
19	YY1	chr2:10587682-10588674	GM12878	blood:	n/a	chr2:10588665-10588674 chr2:10588227-10588238 chr2:10588289-10588303 chr2:10587891-10587902 chr2:10588257-10588271
20	YY1	chr2:10588282-10588680	ECC-1	luminal epithelium:	n/a	chr2:10588665-10588674 chr2:10588289-10588303 chr2:10588663-10588677
21	IRF1	chr2:10588306-10589076	K562	blood:	n/a	chr2:10588661-10588675
22	POLR2A	chr2:10588057-10588631	PANC-1	pancreas:	n/a	n/a
23	POU2F2	chr2:10588022-10588689	GM12878	blood:	n/a	n/a
24	MAZ	chr2:10587743-10589264	HepG2	liver:	n/a	chr2:10588126-10588135 chr2:10588941-10588950 chr2:10588939-10588948 chr2:10588651-10588660 chr2:10588126-10588136 chr2:10588125-10588136 chr2:10588939-10588949 chr2:10588496-10588505 chr2:10588124-10588137 chr2:10588938-10588949 chr2:10588125-10588134 chr2:10588938-10588948 chr2:10588125-10588136 chr2:10588938-10588949 chr2:10588930-10588946 chr2:10588939-10588948 chr2:10588500-10588509 chr2:10588125-10588136 chr2:10588124-10588137 chr2:10588939-10588948
25	IRF1	chr2:10588039-10589316	K562	blood:	n/a	chr2:10588661-10588675
26	ELK1	chr2:10588419-10588604	K562	blood:	n/a	n/a
27	ELK1	chr2:10588380-10588623	GM12878	blood:	n/a	n/a
28	TCF7L2	chr2:10587984-10589095	HCT-116	colon:	n/a	n/a
29	CHD2	chr2:10587612-10589347	Hela-S3	cervix:	n/a	n/a
30	ZKSCAN1	chr2:10588220-10588552	Hela-S3	cervix:	n/a	n/a
31	TAF7	chr2:10588028-10588658	H1-hESC	embryonic stem cell:	n/a	n/a
32	GTF2B	chr2:10588375-10589076	K562	blood:	n/a	n/a
33	POLR2A	chr2:10587626-10589558	GM18526	blood:	n/a	n/a
34	YY1	chr2:10588387-10588672	SK-N-SH_RA	brain:	n/a	n/a
35	REST	chr2:10588125-10588571	PFSK-1	brain:	n/a	chr2:10588289-10588302
36	REST	chr2:10587997-10589054	K562	blood:	n/a	chr2:10588289-10588302
37	MAX	chr2:10587436-10589475	A549	lung:	n/a	chr2:10588126-10588135 chr2:10588941-10588950 chr2:10588939-10588948 chr2:10588651-10588660 chr2:10588126-10588136 chr2:10588125-10588136 chr2:10588939-10588949 chr2:10588496-10588505 chr2:10588124-10588137 chr2:10588938-10588949 chr2:10588125-10588134 chr2:10588938-10588948 chr2:10588125-10588136 chr2:10588938-10588949 chr2:10588930-10588946 chr2:10588939-10588948 chr2:10588500-10588509 chr2:10588125-10588136 chr2:10588124-10588137 chr2:10588939-10588948
38	TBL1XR1	chr2:10588110-10589537	K562	blood:	n/a	n/a
39	POLR2A	chr2:10587578-10590208	K562	blood:	n/a	n/a
40	TAF1	chr2:10588229-10588679	SK-N-SH	brain:	n/a	n/a
41	POLR2A	chr2:10587568-10588702	HL-60	blood:	n/a	n/a
42	POLR2A	chr2:10588157-10588577	U87	brain:	n/a	n/a
43	SP1	chr2:10588373-10589070	A549	lung:	n/a	chr2:10588663-10588675 chr2:10588664-10588674 chr2:10588664-10588673 chr2:10588665-10588678 chr2:10589055-10589069 chr2:10588665-10588674 chr2:10588663-10588675
44	ETS1	chr2:10587755-10588627	K562	blood:	n/a	n/a
45	TBP	chr2:10588323-10590473	Hela-S3	cervix:	n/a	n/a
46	BHLHE40	chr2:10587527-10589296	GM12878	blood:	n/a	n/a
47	POLR2A	chr2:10587704-10588662	K562	blood:	n/a	n/a
48	POLR2A	chr2:10587491-10588673	ECC-1	luminal epithelium:	n/a	n/a
49	MXI1	chr2:10587676-10589505	Hela-S3	cervix:	n/a	chr2:10588938-10588947 chr2:10588938-10588947 chr2:10588127-10588136 chr2:10588940-10588949 chr2:10588494-10588509 chr2:10588496-10588511 chr2:10588125-10588134
50	POLR2A	chr2:10588118-10589355	HEK293	kidney:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr2:10588007..10588995-chr20:62587586..62588155,2	Hela-S3	cervix:
2	chr1:85725140..85725768-chr2:10588151..10588652,2	MCF-7	breast:
3	chr2:10259653..10265917-chr2:10585320..10590295,8	MCF-7	breast:
4	chr17:56708807..56709356-chr2:10588054..10588762,2	Hela-S3	cervix:
5	chr2:10587837..10588679-chr9:136214618..136215524,2	Hela-S3	cervix:
6	chr2:10586529..10589550-chr2:10592115..10595368,3	MCF-7	breast:
7	chr2:10420712..10423243-chr2:10586890..10589076,2	K562	blood:
8	chr2:10441623..10444200-chr2:10586906..10588748,2	K562	blood:
9	chr2:10441623..10444177-chr2:10587166..10588748,2	K562	blood:
10	chr2:10183697..10185477-chr2:10588092..10590281,2	K562	blood:
11	chr2:10259839..10264771-chr2:10582056..10590038,19	K562	blood:
12	chr2:10584788..10589777-chr2:10826863..10830293,6	K562	blood:
13	chr2:10259710..10265084-chr2:10586364..10590442,7	MCF-7	breast:
14	chr19:39897578..39898321-chr2:10587983..10588853,2	Hela-S3	cervix:
15	chr12:53400061..53400730-chr2:10588280..10589184,2	Hela-S3	cervix:
16	chr2:10265245..10266788-chr2:10587089..10589177,2	K562	blood:
17	chr2:10191630..10196148-chr2:10586386..10589794,5	K562	blood:
18	chr2:10257984..10265070-chr2:10582045..10589780,17	K562	blood:
19	chr2:10588336..10588842-chr5:34007597..34008142,2	Hela-S3	cervix:
20	chr2:9982517..9985169-chr2:10586715..10588876,2	K562	blood:
21	chr11:77184882..77185407-chr2:10587988..10588765,2	HCT-116	colon:
22	chr18:32072933..32074749-chr2:10587681..10589883,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000217258	TF binding region
ENSG00000257135	TF binding region
SNORA80B	TF binding region
ODC1	TF binding region
ENSG00000063046	Chromatin interaction
ENSG00000212195	Chromatin interaction
ENSG00000198276	Chromatin interaction
ENSG00000134769	Chromatin interaction
ENSG00000148297	Chromatin interaction
ENSG00000115750	Chromatin interaction
ENSG00000115756	Chromatin interaction
ENSG00000162642	Chromatin interaction
ENSG00000172059	Chromatin interaction
ENSG00000242110	Chromatin interaction
ENSG00000115761	Chromatin interaction
ENSG00000148303	Chromatin interaction
ENSG00000128016	Chromatin interaction
ENSG00000217258	Chromatin interaction
ENSG00000149269	Chromatin interaction
ENSG00000271787	Chromatin interaction
ENSG00000171848	Chromatin interaction
ENSG00000272524	Chromatin interaction
ENSG00000264030	Chromatin interaction

Extended variants
information (count: 45 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:45 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530829	chr2:10357105-10655131	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
2	nsv873645	chr2:10537347-10612091	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
3	nsv1007185	chr2:10540386-10791743	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
4	nsv873646	chr2:10550517-10612091	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
5	esv1840383	chr2:10569021-10588903	Active TSS Weak transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
6	nsv873647	chr2:10576424-10597858	Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
7	nsv873648	chr2:10584639-10599493	Active TSS Strong transcription Enhancers Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
8	esv1819730	chr2:10585164-10591407	Flanking Active TSS Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
9	esv1818042	chr2:10585364-10591407	Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
10	esv1840643	chr2:10585364-10607465	Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
11	nsv873649	chr2:10585458-10591628	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
12	nsv873650	chr2:10585458-10597858	Weak transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
13	nsv873651	chr2:10585575-10597858	Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
14	esv1792409	chr2:10585687-10588600	Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS Genic enhancers Enhancers Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	25 gene(s)	inside rSNPs	diseases
15	esv1835530	chr2:10585687-10591407	Flanking Active TSS Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
16	nsv580963	chr2:10586780-10588903	Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
17	esv3388869	chr2:10587326-10589874	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
18	esv3368694	chr2:10587501-10589549	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
19	esv1799664	chr2:10587504-10588903	Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
20	esv1802837	chr2:10587504-10588903	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
21	esv1803350	chr2:10587504-10588903	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
22	esv1818199	chr2:10587504-10591407	Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
23	esv20256	chr2:10587852-10589007	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
24	nsv580964	chr2:10587869-10588801	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	29 gene(s)	inside rSNPs	diseases
25	esv1791866	chr2:10587869-10588903	Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
26	esv1799621	chr2:10587869-10588903	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
27	esv1800628	chr2:10587869-10588903	Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
28	esv1800699	chr2:10587869-10588903	Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
29	esv1800836	chr2:10587869-10588903	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
30	esv1801125	chr2:10587869-10588903	Flanking Active TSS Active TSS Bivalent/Poised TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
31	esv1801304	chr2:10587869-10588903	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
32	esv1804063	chr2:10587869-10588903	Weak transcription Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
33	esv1836761	chr2:10587869-10588903	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
34	nsv580965	chr2:10587869-10588903	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
35	esv1836092	chr2:10587869-10591407	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
36	esv1835846	chr2:10587869-10591628	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
37	esv1835907	chr2:10587869-10591628	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
38	esv1838652	chr2:10587869-10591628	Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
39	esv1844482	chr2:10587869-10591628	Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
40	esv1844642	chr2:10587869-10591628	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
41	esv1839493	chr2:10587869-10595578	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
42	esv1841500	chr2:10587869-10595578	Weak transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
43	esv1842177	chr2:10587869-10595578	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
44	esv1835263	chr2:10587869-10611211	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
45	nsv580967	chr2:10588031-10588903	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:10585600-10589000	Active TSS	GM12878-XiMat	blood
2	chr2:10586000-10589600	Active TSS	Pancreatic Islets	Pancreatic Islet
3	chr2:10586200-10588800	Active TSS	Fetal Muscle Trunk	muscle
4	chr2:10586200-10589000	Active TSS	HSMM	muscle
5	chr2:10586200-10589000	Active TSS	HSMMtube	muscle
6	chr2:10586200-10589800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr2:10586400-10588800	Active TSS	Colonic Mucosa	Colon
8	chr2:10586400-10589000	Active TSS	Hela-S3	cervix
9	chr2:10586600-10589000	Active TSS	ES-I3 Cell Line	embryonic stem cell
10	chr2:10586600-10589000	Active TSS	NHLF	lung
11	chr2:10586600-10589400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr2:10586600-10589400	Active TSS	Psoas Muscle	Psoas
13	chr2:10586600-10589800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr2:10586800-10589400	Active TSS	Fetal Brain Female	brain
15	chr2:10586800-10589600	Active TSS	Lung	lung
16	chr2:10587000-10588800	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr2:10587000-10589000	Active TSS	Sigmoid Colon	Sigmoid Colon
18	chr2:10587000-10589000	Active TSS	A549	lung
19	chr2:10587000-10589200	Active TSS	Brain Anterior Caudate	brain
20	chr2:10587000-10589400	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
21	chr2:10587200-10588800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr2:10587200-10589000	Active TSS	Breast Myoepithelial Primary Cells	Breast
23	chr2:10587200-10589200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr2:10587200-10589200	Active TSS	Fetal Intestine Small	intestine
25	chr2:10587200-10589600	Active TSS	Brain Angular Gyrus	brain
26	chr2:10587200-10589600	Active TSS	Small Intestine	intestine
27	chr2:10587200-10589800	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
28	chr2:10587400-10588800	Active TSS	Primary T helper cells PMA-I stimulated	--
29	chr2:10587400-10588800	Active TSS	Muscle Satellite Cultured Cells	--
30	chr2:10587400-10588800	Active TSS	Pancreas	Pancrea
31	chr2:10587400-10589400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr2:10587400-10589400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
33	chr2:10587400-10589400	Active TSS	Ovary	ovary
34	chr2:10587400-10589600	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
35	chr2:10587400-10589600	Active TSS	H9 Cell Line	embryonic stem cell
36	chr2:10587400-10589600	Active TSS	Left Ventricle	heart
37	chr2:10587400-10589800	Active TSS	Right Ventricle	heart
38	chr2:10587600-10588800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr2:10587600-10588800	Active TSS	Dnd41	blood
40	chr2:10587600-10589000	Active TSS	Duodenum Mucosa	Duodenum
41	chr2:10587600-10589200	Active TSS	Brain Substantia Nigra	brain
42	chr2:10587600-10589200	Active TSS	Gastric	stomach
43	chr2:10587600-10589400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr2:10587600-10589400	Active TSS	Fetal Stomach	stomach
45	chr2:10587600-10589400	Active TSS	K562	blood
46	chr2:10587600-10589600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
47	chr2:10587600-10589600	Active TSS	Aorta	Aorta
48	chr2:10587600-10589600	Active TSS	Colon Smooth Muscle	Colon
49	chr2:10587600-10589600	Active TSS	NHDF-Ad	bronchial
50	chr2:10587600-10589800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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