Variant report

Variant rs28364020
Chromosome Location chr17:43861853-43861854
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43860400-43863000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
2 chr17:43860400-43863000 Bivalent Enhancer Spleen Spleen
3 chr17:43860600-43862800 Bivalent/Poised TSS A549 lung
4 chr17:43860600-43863000 Active TSS Right Atrium heart
5 chr17:43860600-43863200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
6 chr17:43860600-43863400 Bivalent/Poised TSS Fetal Brain Female brain
7 chr17:43860800-43862000 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
8 chr17:43860800-43862000 Bivalent Enhancer HUVEC blood vessel
9 chr17:43860800-43862000 Bivalent/Poised TSS NH-A brain
10 chr17:43860800-43862200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr17:43860800-43862200 Enhancers Liver Liver
12 chr17:43860800-43862200 Bivalent Enhancer Placenta Placenta
13 chr17:43860800-43862200 Bivalent/Poised TSS Psoas Muscle Psoas
14 chr17:43860800-43862400 Flanking Active TSS Primary hematopoietic stem cells blood
15 chr17:43860800-43862600 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr17:43860800-43862600 Bivalent/Poised TSS HSMMtube muscle
17 chr17:43860800-43862800 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr17:43860800-43862800 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
19 chr17:43860800-43862800 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr17:43860800-43862800 Active TSS Brain Substantia Nigra brain
21 chr17:43860800-43863000 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
22 chr17:43860800-43863000 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr17:43860800-43863000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
24 chr17:43860800-43863000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
25 chr17:43860800-43863000 Bivalent/Poised TSS Primary T cells from cord blood blood
26 chr17:43860800-43863000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr17:43860800-43863000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr17:43860800-43863000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
29 chr17:43860800-43863000 Active TSS Aorta Aorta
30 chr17:43860800-43863200 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
31 chr17:43860800-43863200 Active TSS Brain Angular Gyrus brain
32 chr17:43860800-43863200 Active TSS Brain Cingulate Gyrus brain
33 chr17:43860800-43863400 Active TSS Brain Inferior Temporal Lobe brain
34 chr17:43860800-43863400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
35 chr17:43860800-43863600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
36 chr17:43861000-43862000 Bivalent/Poised TSS Colon Smooth Muscle Colon
37 chr17:43861000-43862200 Active TSS H9 Cell Line embryonic stem cell
38 chr17:43861000-43862200 Bivalent Enhancer Stomach Mucosa stomach
39 chr17:43861000-43862600 Bivalent Enhancer Primary monocytes fromperipheralblood blood
40 chr17:43861000-43862800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
41 chr17:43861000-43862800 Bivalent/Poised TSS Rectal Smooth Muscle rectum
42 chr17:43861000-43863000 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr17:43861000-43863000 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
44 chr17:43861000-43863000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
45 chr17:43861000-43863000 Bivalent Enhancer Fetal Lung lung
46 chr17:43861000-43863000 Bivalent/Poised TSS HSMM muscle
47 chr17:43861200-43862000 Active TSS Breast Myoepithelial Primary Cells Breast
48 chr17:43861200-43862000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr17:43861200-43862000 Bivalent/Poised TSS Fetal Stomach stomach
50 chr17:43861200-43862000 Bivalent/Poised TSS Left Ventricle heart

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