Variant report

Variant	rs2836474
Chromosome Location	chr21:39902512-39902513
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1015022	0.83[CHB][hapmap];0.90[JPT][hapmap]
rs11088432	0.84[EUR][1000 genomes]
rs2836443	0.82[CHB][hapmap];0.90[JPT][hapmap]
rs2836445	0.82[CHB][hapmap];0.90[JPT][hapmap]
rs2836458	0.93[CEU][hapmap];0.92[CHB][hapmap];0.91[JPT][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2836466	1.00[CEU][hapmap];0.92[CHB][hapmap];0.91[JPT][hapmap];0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2836469	1.00[CEU][hapmap];0.92[CHB][hapmap];0.90[JPT][hapmap];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2836472	1.00[CEU][hapmap];0.92[CHB][hapmap];0.90[JPT][hapmap];0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2836473	1.00[CEU][hapmap];0.92[CHB][hapmap];0.91[JPT][hapmap];0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3827204	1.00[CEU][hapmap];0.92[CHB][hapmap];0.91[JPT][hapmap];0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9305650	0.88[CEU][hapmap];0.92[CHB][hapmap];0.90[JPT][hapmap];0.85[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39896000-39910400	Weak transcription	Small Intestine	intestine
2	chr21:39897800-39903000	Weak transcription	Aorta	Aorta
3	chr21:39900200-39904400	Weak transcription	HepG2	liver
4	chr21:39901400-39902800	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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