The 2.0 version of rSNPBase

Variant report

Variant rs2836684
Chromosome Location chr21:40197707-40197708
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:40180200-40198400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr21:40192600-40198200 Weak transcription Primary B cells from peripheral blood blood
3 chr21:40194200-40202800 Weak transcription Stomach Mucosa stomach
4 chr21:40194400-40202800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr21:40194600-40203200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr21:40194800-40198400 Weak transcription Brain Hippocampus Middle brain
7 chr21:40195000-40200600 Weak transcription Brain Angular Gyrus brain
8 chr21:40195000-40202800 Weak transcription Psoas Muscle Psoas
9 chr21:40195000-40212600 Weak transcription Right Atrium heart
10 chr21:40195200-40197800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr21:40195200-40198200 Weak transcription Brain Substantia Nigra brain
12 chr21:40195200-40198400 Weak transcription Lung lung
13 chr21:40195200-40198600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr21:40195200-40202800 Weak transcription Colonic Mucosa Colon
15 chr21:40195200-40202800 Weak transcription Small Intestine intestine
16 chr21:40195200-40202800 Weak transcription GM12878-XiMat blood
17 chr21:40195200-40203400 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr21:40195200-40204800 Weak transcription Aorta Aorta
19 chr21:40195200-40213800 Weak transcription Fetal Kidney kidney
20 chr21:40195800-40202800 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr21:40196000-40198000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr21:40196200-40198000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr21:40196200-40198000 Enhancers HepG2 liver
24 chr21:40196400-40198400 Weak transcription Primary B cells from cord blood blood
25 chr21:40196400-40202800 Weak transcription Placenta Amnion Placenta Amnion
26 chr21:40196400-40206600 Weak transcription Gastric stomach
27 chr21:40196400-40229000 Weak transcription Right Ventricle heart
28 chr21:40196600-40197800 Weak transcription H1 Cell Line embryonic stem cell
29 chr21:40196600-40197800 Weak transcription Fetal Muscle Trunk muscle
30 chr21:40196600-40198200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr21:40196600-40198200 Weak transcription Brain Anterior Caudate brain
32 chr21:40196600-40198200 Weak transcription HMEC breast
33 chr21:40196600-40199000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr21:40196600-40200600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr21:40196600-40202800 Weak transcription Primary T cells fromperipheralblood blood
36 chr21:40196600-40202800 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr21:40196600-40202800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr21:40196600-40202800 Weak transcription Hela-S3 cervix
39 chr21:40196600-40202800 Weak transcription K562 blood
40 chr21:40196600-40202800 Weak transcription NHEK skin
41 chr21:40196600-40203000 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr21:40196600-40203000 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr21:40196600-40203000 Weak transcription Muscle Satellite Cultured Cells --
44 chr21:40196600-40203400 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr21:40196600-40205000 Weak transcription H9 Cell Line embryonic stem cell
46 chr21:40196600-40211000 Weak transcription Pancreas Pancrea
47 chr21:40196800-40198200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr21:40196800-40198200 Weak transcription Primary T cells from cord blood blood
49 chr21:40196800-40198200 Weak transcription Spleen Spleen
50 chr21:40196800-40198400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015