Variant report

Variant	rs28367047
Chromosome Location	chr2:190758074-190758075
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10209952	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10210548	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13408971	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13418171	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13432549	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs5743009	1.00[AMR][1000 genomes]
rs5743018	1.00[AMR][1000 genomes]
rs5743026	1.00[AMR][1000 genomes]
rs5743042	1.00[AMR][1000 genomes]
rs5743064	1.00[AMR][1000 genomes]
rs5743071	1.00[AMR][1000 genomes]
rs5743075	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs5743176	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs5743195	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7355626	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7600993	1.00[AMR][1000 genomes]
rs9630990	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:190744600-190758200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr2:190758000-190761200	Weak transcription	HepG2	liver

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links