Variant report
| Variant | rs28379960 |
|---|---|
| Chromosome Location | chr15:57815364-57815365 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:57797000-57827200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr15:57801800-57819000 | Weak transcription | Esophagus | oesophagus |
| 3 | chr15:57802000-57819600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 4 | chr15:57802600-57846600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 5 | chr15:57802800-57822600 | Weak transcription | Brain Hippocampus Middle | brain |
| 6 | chr15:57803000-57818800 | Weak transcription | Fetal Intestine Large | intestine |
| 7 | chr15:57803200-57819400 | Weak transcription | Ovary | ovary |
| 8 | chr15:57803200-57842800 | Weak transcription | Aorta | Aorta |
| 9 | chr15:57807000-57816200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 10 | chr15:57807000-57818400 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 11 | chr15:57808400-57817200 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 12 | chr15:57808600-57817200 | Strong transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 13 | chr15:57808600-57817800 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 14 | chr15:57808800-57818000 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 15 | chr15:57808800-57818000 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 16 | chr15:57808800-57818200 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 17 | chr15:57809000-57817200 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 18 | chr15:57809400-57816600 | Weak transcription | Fetal Muscle Leg | muscle |
| 19 | chr15:57809800-57815600 | Weak transcription | Lung | lung |
| 20 | chr15:57811000-57816400 | Weak transcription | Placenta | Placenta |
| 21 | chr15:57811000-57827800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 22 | chr15:57811200-57815400 | Weak transcription | HepG2 | liver |
| 23 | chr15:57811200-57819400 | Weak transcription | Fetal Intestine Small | intestine |
| 24 | chr15:57811600-57817200 | Weak transcription | HUVEC | blood vessel |
| 25 | chr15:57812400-57819400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 26 | chr15:57813200-57816000 | Enhancers | Fetal Heart | heart |
| 27 | chr15:57813800-57816400 | Strong transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 28 | chr15:57813800-57817200 | Strong transcription | Fetal Stomach | stomach |
| 29 | chr15:57814000-57815400 | Enhancers | Fetal Kidney | kidney |
| 30 | chr15:57814200-57815400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 31 | chr15:57814200-57816400 | Weak transcription | Gastric | stomach |
| 32 | chr15:57814400-57816000 | Strong transcription | iPS-15b Cell Line | embryonic stem cell |
| 33 | chr15:57814400-57817200 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 34 | chr15:57814600-57819400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 35 | chr15:57814600-57819400 | Weak transcription | Brain Substantia Nigra | brain |
| 36 | chr15:57814600-57819600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 37 | chr15:57814600-57819600 | Strong transcription | Liver | Liver |
| 38 | chr15:57814800-57816400 | Weak transcription | Pancreas | Pancrea |
| 39 | chr15:57814800-57819000 | Weak transcription | Left Ventricle | heart |
| 40 | chr15:57814800-57819400 | Weak transcription | Brain Anterior Caudate | brain |
| 41 | chr15:57814800-57819400 | Weak transcription | Fetal Lung | lung |
| 42 | chr15:57814800-57819400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 43 | chr15:57814800-57819400 | Weak transcription | Right Atrium | heart |
| 44 | chr15:57814800-57819600 | Weak transcription | Brain Angular Gyrus | brain |
| 45 | chr15:57815000-57816200 | Weak transcription | Stomach Mucosa | stomach |
| 46 | chr15:57815200-57816400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 47 | chr15:57815200-57818400 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 48 | chr15:57815200-57819600 | Weak transcription | Colon Smooth Muscle | Colon |
| 49 | chr15:57815200-57819600 | Weak transcription | Rectal Smooth Muscle | rectum |
