The 2.0 version of rSNPBase

Variant report

Variant rs28380238
Chromosome Location chr4:110607458-110607459
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:110572600-110623200 Weak transcription Esophagus oesophagus
2 chr4:110579200-110608400 Weak transcription Ovary ovary
3 chr4:110584400-110608800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr4:110585800-110608800 Weak transcription Adipose Nuclei Adipose
5 chr4:110589600-110623200 Weak transcription Brain Substantia Nigra brain
6 chr4:110591200-110608600 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr4:110592000-110611600 Weak transcription Rectal Smooth Muscle rectum
8 chr4:110593000-110608200 Weak transcription Fetal Lung lung
9 chr4:110593800-110611600 Weak transcription K562 blood
10 chr4:110598400-110608200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr4:110598600-110610400 Weak transcription HSMMtube muscle
12 chr4:110598800-110611200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr4:110598800-110622800 Weak transcription NHEK skin
14 chr4:110599400-110611400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr4:110600000-110610600 Weak transcription Colon Smooth Muscle Colon
16 chr4:110600000-110611400 Weak transcription Spleen Spleen
17 chr4:110600200-110613200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr4:110600400-110610000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr4:110600400-110610200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr4:110600400-110611800 Weak transcription NHDF-Ad bronchial
21 chr4:110600600-110611200 Weak transcription HSMM muscle
22 chr4:110600800-110622600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr4:110601000-110608400 Weak transcription Duodenum Mucosa Duodenum
24 chr4:110601200-110610200 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr4:110601200-110611400 Weak transcription Gastric stomach
26 chr4:110601200-110615800 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr4:110601400-110608400 Weak transcription Fetal Muscle Trunk muscle
28 chr4:110601400-110610800 Strong transcription Primary T cells fromperipheralblood blood
29 chr4:110601600-110608600 Weak transcription Placenta Placenta
30 chr4:110601600-110611000 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr4:110601600-110613400 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr4:110601800-110622800 Weak transcription Right Atrium heart
33 chr4:110602200-110611800 Weak transcription Brain Germinal Matrix brain
34 chr4:110602400-110612000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr4:110602600-110612000 Weak transcription NHLF lung
36 chr4:110602600-110620000 Weak transcription Small Intestine intestine
37 chr4:110602800-110609000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr4:110603000-110610200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr4:110603000-110611400 Weak transcription Pancreas Pancrea
40 chr4:110603200-110611800 Weak transcription Brain Anterior Caudate brain
41 chr4:110603400-110612000 Weak transcription Aorta Aorta
42 chr4:110603600-110607600 Weak transcription Fetal Intestine Large intestine
43 chr4:110603800-110609400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr4:110603800-110611000 Strong transcription Primary T helper cells PMA-I stimulated --
45 chr4:110604200-110608400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr4:110604200-110608600 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr4:110604200-110608600 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr4:110604200-110611400 Weak transcription H1 Cell Line embryonic stem cell
49 chr4:110604200-110611400 Weak transcription H9 Cell Line embryonic stem cell
50 chr4:110604200-110611400 Weak transcription Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015