Variant report

Variant	rs28382838
Chromosome Location	chr12:57914269-57914270
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TAF1	chr12:57913924-57914547	H1-neurons	neurons:	n/a	n/a
2	HDAC2	chr12:57913956-57914431	K562	blood:	n/a	n/a
3	EP300	chr12:57914078-57914825	ECC-1	luminal epithelium:	n/a	chr12:57914489-57914496 chr12:57914339-57914355 chr12:57914530-57914539
4	MAX	chr12:57913556-57914934	ECC-1	luminal epithelium:	n/a	chr12:57914685-57914695 chr12:57914666-57914676
5	POLR2A	chr12:57912900-57914413	HepG2	liver:	n/a	n/a
6	BRCA1	chr12:57913742-57914412	GM12878	blood:	n/a	n/a
7	BCLAF1	chr12:57912791-57914432	K562	blood:	n/a	n/a
8	JUND	chr12:57914087-57914676	H1-hESC	embryonic stem cell:	n/a	chr12:57914529-57914541 chr12:57914368-57914377 chr12:57914529-57914540 chr12:57914532-57914539 chr12:57914529-57914540 chr12:57914530-57914539
9	ELF1	chr12:57913260-57915053	MCF-7	breast:	n/a	chr12:57914486-57914497 chr12:57914486-57914497 chr12:57914487-57914496 chr12:57914484-57914497
10	RFX5	chr12:57913795-57914766	K562	blood:	n/a	n/a
11	E2F4	chr12:57913763-57914892	K562	blood:	n/a	chr12:57914691-57914701 chr12:57914627-57914636
12	YY1	chr12:57914116-57914944	HepG2	liver:	n/a	n/a
13	PBX3	chr12:57913679-57914763	SK-N-SH	brain:	n/a	n/a
14	EP300	chr12:57914037-57914879	GM12878	blood:	n/a	chr12:57914489-57914496 chr12:57914339-57914355 chr12:57914530-57914539
15	FOSL2	chr12:57913476-57915048	A549	lung:	n/a	chr12:57914529-57914541 chr12:57914368-57914377 chr12:57914529-57914540 chr12:57914532-57914539 chr12:57914530-57914539
16	POLR2A	chr12:57912744-57914555	GM12892	blood:	n/a	n/a
17	GATA3	chr12:57913373-57914894	A549	lung:	n/a	chr12:57913703-57913712
18	FOSL2	chr12:57913986-57914687	A549	lung:	n/a	chr12:57914529-57914541 chr12:57914368-57914377 chr12:57914529-57914540 chr12:57914532-57914539 chr12:57914530-57914539
19	ELF1	chr12:57913238-57914781	GM12878	blood:	n/a	chr12:57914486-57914497 chr12:57914486-57914497 chr12:57914487-57914496 chr12:57914484-57914497
20	POLR2A	chr12:57913193-57914952	GM12878	blood:	n/a	n/a
21	POLR2A	chr12:57912794-57914529	K562	blood:	n/a	n/a
22	JUND	chr12:57913122-57914921	H1-hESC	embryonic stem cell:	n/a	chr12:57914529-57914541 chr12:57914368-57914377 chr12:57914529-57914540 chr12:57914532-57914539 chr12:57914529-57914540 chr12:57914530-57914539
23	GABPA	chr12:57914048-57914667	A549	lung:	n/a	chr12:57914626-57914635 chr12:57914626-57914640 chr12:57914626-57914637
24	MYBL2	chr12:57913541-57915009	HepG2	liver:	n/a	chr12:57914712-57914727
25	MAX	chr12:57913594-57914914	SK-N-SH	brain:	n/a	chr12:57914685-57914695 chr12:57914666-57914676
26	TAF1	chr12:57913994-57914562	MCF-7	breast:	n/a	n/a
27	MAZ	chr12:57913613-57915032	K562	blood:	n/a	chr12:57914685-57914695 chr12:57914666-57914676
28	EP300	chr12:57914210-57914702	H1-hESC	embryonic stem cell:	n/a	chr12:57914489-57914496 chr12:57914339-57914355 chr12:57914530-57914539
29	BCL11A	chr12:57913995-57914351	GM12878	blood:	n/a	n/a
30	FOXM1	chr12:57913421-57914475	GM12878	blood:	n/a	n/a
31	HNF4A	chr12:57914134-57914539	HepG2	liver:	n/a	n/a
32	MYC	chr12:57914082-57914666	MCF10A-Er-Src	breast:	n/a	n/a
33	TAF7	chr12:57914032-57914352	K562	blood:	n/a	n/a
34	IRF1	chr12:57913932-57914947	K562	blood:	n/a	chr12:57914346-57914360 chr12:57914436-57914450 chr12:57914684-57914698 chr12:57914394-57914408
35	ETS1	chr12:57913624-57914929	A549	lung:	n/a	chr12:57914488-57914497 chr12:57914489-57914500 chr12:57914488-57914497 chr12:57914489-57914499 chr12:57914488-57914499
36	NFATC1	chr12:57913186-57914567	GM12878	blood:	n/a	n/a
37	NR2F2	chr12:57913378-57915115	K562	blood:	n/a	n/a
38	SIN3AK20	chr12:57913437-57914990	A549	lung:	n/a	n/a
39	SIN3AK20	chr12:57913398-57914906	PANC-1	pancreas:	n/a	n/a
40	ZNF263	chr12:57913201-57914354	HEK293-T-REx	kidney:	n/a	chr12:57914156-57914177
41	MYC	chr12:57913681-57914923	K562	blood:	n/a	chr12:57914685-57914695 chr12:57914666-57914676
42	MYC	chr12:57914195-57914684	K562	blood:	n/a	chr12:57914666-57914676
43	NRF1	chr12:57914267-57914835	H1-hESC	embryonic stem cell:	n/a	chr12:57914626-57914635 chr12:57914625-57914636 chr12:57914626-57914640 chr12:57914626-57914637
44	USF1	chr12:57914134-57914670	A549	lung:	n/a	chr12:57914503-57914514
45	GTF2F1	chr12:57914062-57914444	K562	blood:	n/a	n/a
46	NFYB	chr12:57914115-57914779	K562	blood:	n/a	chr12:57914364-57914378 chr12:57914361-57914376 chr12:57914364-57914377
47	TAF1	chr12:57914093-57914397	GM12892	blood:	n/a	n/a
48	NFATC1	chr12:57913404-57914477	GM12878	blood:	n/a	n/a
49	FOS	chr12:57914171-57914561	MCF10A-Er-Src	breast:	n/a	chr12:57914529-57914541 chr12:57914368-57914377 chr12:57914529-57914540 chr12:57914532-57914539 chr12:57914530-57914539
50	NFYA	chr12:57914235-57914600	GM12878	blood:	n/a	chr12:57914364-57914382 chr12:57914364-57914378 chr12:57914364-57914377

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:57914238-57914288	AG09309	skin:	n/a
2	chr12:57914238-57914288	AG04450	lung:	fetal
3	chr12:57914238-57914288	HMEC	breast:	n/a
4	chr12:57914238-57914288	PFSK-1	brain:	n/a
5	chr12:57914238-57914288	NT2-D1	testis:	n/a
6	chr12:57914238-57914288	HRPEpiC	eye:	n/a
7	chr12:57914238-57914288	SAEC	small airway:	n/a
8	chr12:57914238-57914288	RPTEC	kidney:	n/a
9	chr12:57914238-57914288	Jurkat	blood:	n/a
10	chr12:57914238-57914288	AG04449	skin:	fetal
11	chr12:57914238-57914288	ovcar-3	ovarian:	n/a
12	chr12:57914238-57914288	GM06990	blood:	n/a
13	chr12:57914238-57914288	HEK293	kidney:	embryo
14	chr12:57914238-57914288	Hepatocyte	liver:	n/a
15	chr12:57914238-57914288	MCF-7	breast:	n/a
16	chr12:57914238-57914288	GM19239	blood:	n/a
17	chr12:57914238-57914288	AoSMC	blood vessel:	n/a
18	chr12:57914238-57914288	HCT-116	colon:	n/a
19	chr12:57914238-57914288	HCM	heart:	n/a
20	chr12:57914238-57914288	HPAEpiC	pulmonary alveolar:	n/a
21	chr12:57914238-57914288	HRE	kidney:	n/a
22	chr12:57914238-57914288	HCF	heart:	n/a
23	chr12:57914238-57914288	HUVEC	blood vessel:	n/a
24	chr12:57914238-57914288	HNPCEpiC	eye:	n/a
25	chr12:57914238-57914288	NH-A	brain:	n/a
26	chr12:57914238-57914288	GM12891	blood:	n/a
27	chr12:57914238-57914288	NHBE	bronchial:	n/a
28	chr12:57914238-57914288	GM12892	blood:	n/a
29	chr12:57914238-57914288	NHDF-neo	bronchial:	n/a
30	chr12:57914238-57914288	T-47D	breast:	n/a
31	chr12:57914238-57914288	HL-60	blood:	n/a
32	chr12:57914238-57914288	Hela-S3	cervix:	n/a
33	chr12:57914238-57914288	HCPEpiC	choroid plexus:	n/a
34	chr12:57914238-57914288	SK-N-MC	brain:	n/a
35	chr12:57914238-57914288	HepG2	liver:	n/a
36	chr12:57914238-57914288	U87	brain:	n/a
37	chr12:57914238-57914288	H1-hESC	embryonic stem cell:	embryo
38	chr12:57914238-57914288	ECC-1	luminal epithelium:	n/a
39	chr12:57914238-57914288	SK-N-SH_RA	brain:	n/a
40	chr12:57914238-57914288	AG09319	gingival:	n/a
41	chr12:57914238-57914288	SK-N-SH	brain:	n/a
42	chr12:57914238-57914288	BE2_C	brain:	n/a
43	chr12:57914238-57914288	PrEC	prostate:	n/a
44	chr12:57914238-57914288	IMR90	lung:	fetal
45	chr12:57914238-57914288	MCF10A-Er-Src	breast:	n/a
46	chr12:57914238-57914288	NB4	blood:	n/a
47	chr12:57914238-57914288	SKMC	muscle:	n/a
48	chr12:57914238-57914288	GM12878	blood:	n/a
49	chr12:57914238-57914288	BJ	skin:	n/a
50	chr12:57914238-57914288	HAEpiC	amniotic membrane:	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:57896559..57899422-chr12:57912129..57915670,4	MCF-7	breast:
2	chr12:57911911..57916321-chr12:58013702..58018076,7	K562	blood:
3	chr12:57912814..57915992-chr12:58164344..58170030,6	K562	blood:
4	chr12:57913894..57914426-chr19:47291447..47292286,2	NB4	blood:
5	chr12:57912789..57915911-chr12:58119258..58122771,4	MCF-7	breast:
6	chr12:57879207..57888227-chr12:57906247..57918451,36	K562	blood:
7	chr12:57913779..57914746-chr12:120638586..120639342,2	Hela-S3	cervix:
8	chr12:57849885..57859254-chr12:57908711..57915821,16	K562	blood:
9	chr12:57911913..57914667-chr12:58122854..58126849,5	K562	blood:
10	chr12:57913785..57915861-chr12:58131130..58132834,2	MCF-7	breast:
11	chr12:57909973..57915898-chr12:58127755..58134567,15	K562	blood:
12	chr12:57913428..57916180-chr12:58009743..58011363,2	MCF-7	breast:
13	chr12:57913580..57915686-chr3:186500312..186502115,2	K562	blood:
14	chr12:57482701..57484968-chr12:57912943..57915607,2	K562	blood:
15	chr12:57844795..57846828-chr12:57912360..57915235,2	K562	blood:
16	chr12:57912095..57914310-chr12:58137199..58139977,2	MCF-7	breast:
17	chr12:57908910..57916122-chr12:58022622..58031573,17	K562	blood:
18	chr12:57912185..57914600-chr12:58159460..58162214,2	MCF-7	breast:
19	chr12:57913372..57915977-chr12:58164344..58168645,6	K562	blood:
20	chr12:57481972..57484968-chr12:57912943..57915711,3	K562	blood:
21	chr1:45186930..45187765-chr12:57913881..57914510,2	Hela-S3	cervix:
22	chr12:57913854..57914588-chr6:42749236..42750176,2	NB4	blood:
23	chr12:57914216..57914728-chr20:30192967..30193655,2	Hela-S3	cervix:
24	chr12:57913753..57916510-chr12:57996799..57998980,2	MCF-7	breast:
25	chr12:57912351..57915137-chr12:123457151..123459849,2	MCF-7	breast:
26	chr12:57890108..57896575-chr12:57912675..57917509,9	MCF-7	breast:
27	chr12:57914171..57915978-chr17:7477098..7479787,2	K562	blood:
28	chr12:57911754..57916322-chr12:58006406..58010716,5	K562	blood:
29	chr12:57913742..57914275-chr2:152685123..152685804,2	NB4	blood:
30	chr12:57913836..57914343-chr6:33239424..33240233,2	Hela-S3	cervix:
31	chr12:57852034..57858739-chr12:57911478..57917144,8	MCF-7	breast:
32	chr12:57914072..57914704-chr20:44562898..44563852,2	Hela-S3	cervix:
33	chr12:57913915..57915790-chr12:58160271..58161971,2	K562	blood:
34	chr12:57890573..57894514-chr12:57912146..57915649,5	MCF-7	breast:
35	chr12:57912625..57916215-chr12:58016074..58021603,6	K562	blood:
36	chr12:57504297..57506736-chr12:57913264..57915546,2	MCF-7	breast:
37	chr12:57913857..57916876-chr12:58140485..58143986,3	K562	blood:
38	chr12:57871859..57875002-chr12:57911901..57914526,3	K562	blood:
39	chr12:57913424..57914393-chr9:132388350..132389196,2	Hela-S3	cervix:
40	chr12:57858770..57860862-chr12:57912949..57914502,2	MCF-7	breast:
41	chr12:57871719..57874359-chr12:57913952..57915597,2	MCF-7	breast:
42	chr12:57850154..57858218-chr12:57910899..57919538,20	K562	blood:
43	chr12:57912627..57914339-chr12:57984799..57986574,2	MCF-7	breast:
44	chr12:57912525..57914628-chr12:58024523..58026539,2	MCF-7	breast:
45	chr12:57912759..57917021-chr12:58137187..58141030,5	MCF-7	breast:
46	chr12:57914055..57914634-chr12:58087066..58087962,2	MCF-7	breast:
47	chr12:57912866..57916321-chr12:58013594..58015753,4	K562	blood:
48	chr12:57911462..57914270-chr12:58144691..58146581,3	MCF-7	breast:
49	chr12:57911699..57918406-chr12:58000825..58010019,18	K562	blood:
50	chr12:57889487..57901620-chr12:57907600..57919310,30	K562	blood:

Variant related genes	Relation type
MBD6	TF binding region
MIR616	TF binding region
MBD6	CpG island
MIR616	CpG island
ENSG00000166986	Chromatin interaction
ENSG00000139266	Chromatin interaction
ENSG00000125968	Chromatin interaction
ENSG00000139269	Chromatin interaction
ENSG00000223501	Chromatin interaction
ENSG00000266465	Chromatin interaction
ENSG00000067225	Chromatin interaction
ENSG00000257499	Chromatin interaction
ENSG00000161960	Chromatin interaction
ENSG00000166886	Chromatin interaction
ENSG00000263826	Chromatin interaction
ENSG00000111087	Chromatin interaction
ENSG00000111012	Chromatin interaction
ENSG00000240771	Chromatin interaction
ENSG00000135454	Chromatin interaction
ENSG00000253320	Chromatin interaction
ENSG00000135439	Chromatin interaction
ENSG00000255857	Chromatin interaction
ENSG00000148335	Chromatin interaction
ENSG00000231500	Chromatin interaction
ENSG00000112308	Chromatin interaction
ENSG00000178498	Chromatin interaction
ENSG00000037897	Chromatin interaction
ENSG00000189159	Chromatin interaction
ENSG00000182199	Chromatin interaction
ENSG00000135506	Chromatin interaction
ENSG00000104067	Chromatin interaction
ENSG00000123329	Chromatin interaction
ENSG00000100982	Chromatin interaction
ENSG00000025293	Chromatin interaction
ENSG00000255737	Chromatin interaction
ENSG00000112624	Chromatin interaction
ENSG00000089157	Chromatin interaction
ENSG00000224713	Chromatin interaction
ENSG00000150967	Chromatin interaction
ENSG00000123427	Chromatin interaction
ENSG00000166888	Chromatin interaction
ENSG00000155096	Chromatin interaction
ENSG00000166908	Chromatin interaction
ENSG00000209582	Chromatin interaction
ENSG00000156976	Chromatin interaction
ENSG00000257921	Chromatin interaction
ENSG00000135446	Chromatin interaction
ENSG00000135502	Chromatin interaction
ENSG00000111325	Chromatin interaction
ENSG00000135452	Chromatin interaction
ENSG00000105281	Chromatin interaction
ENSG00000199377	Chromatin interaction

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs11613457	1.00[YRI][hapmap]
rs11614506	1.00[YRI][hapmap]
rs2599999	1.00[AFR][1000 genomes]
rs4760278	1.00[YRI][hapmap]
rs7305391	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899117	chr12:57811414-57926472	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	103 gene(s)	inside rSNPs	diseases
2	nsv899118	chr12:57811414-57946477	Weak transcription Strong transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	106 gene(s)	inside rSNPs	diseases
3	esv1812398	chr12:57829733-58001868	Flanking Active TSS Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
4	esv2758310	chr12:57829733-58001868	Active TSS Genic enhancers Enhancers Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
5	esv2759901	chr12:57829733-58001868	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
6	nsv428283	chr12:57829733-58001868	Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Weak transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
7	nsv469411	chr12:57844049-57921188	Active TSS Flanking Active TSS Strong transcription Weak transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
8	nsv559032	chr12:57844049-57921188	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
9	nsv559033	chr12:57848639-57946477	Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	92 gene(s)	inside rSNPs	diseases
10	nsv899119	chr12:57851182-57923451	Strong transcription Flanking Active TSS Active TSS Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
11	nsv559034	chr12:57859932-58012233	Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
12	nsv1038741	chr12:57877355-58174506	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	126 gene(s)	inside rSNPs	diseases
13	nsv541503	chr12:57877355-58174506	Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	126 gene(s)	inside rSNPs	diseases
14	nsv899120	chr12:57886609-57921188	Active TSS Genic enhancers Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	72 gene(s)	inside rSNPs	diseases
15	nsv559036	chr12:57911212-57916042	Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region miRNA	68 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:57911800-57915000	Active TSS	Right Ventricle	heart
2	chr12:57912000-57915000	Active TSS	Left Ventricle	heart
3	chr12:57912000-57917600	Active TSS	Psoas Muscle	Psoas
4	chr12:57912200-57915000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr12:57912400-57914600	Active TSS	HSMMtube	muscle
6	chr12:57912400-57914800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr12:57912400-57918600	Active TSS	Pancreatic Islets	Pancreatic Islet
8	chr12:57912600-57914400	Active TSS	Ovary	ovary
9	chr12:57912600-57914400	Active TSS	NHLF	lung
10	chr12:57912600-57915000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr12:57912600-57915000	Active TSS	Aorta	Aorta
12	chr12:57912800-57915000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr12:57912800-57915000	Active TSS	Lung	lung
14	chr12:57912800-57915800	Active TSS	H9 Cell Line	embryonic stem cell
15	chr12:57913000-57914400	Active TSS	NHDF-Ad	bronchial
16	chr12:57913000-57914800	Active TSS	Fetal Intestine Large	intestine
17	chr12:57913000-57915200	Active TSS	HUES64 Cell Line	embryonic stem cell
18	chr12:57913000-57915200	Active TSS	iPS-18 Cell Line	embryonic stem cell
19	chr12:57913200-57914400	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr12:57913200-57914400	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
21	chr12:57913200-57914400	Active TSS	Gastric	stomach
22	chr12:57913200-57914800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr12:57913200-57914800	Active TSS	Fetal Lung	lung
24	chr12:57913200-57914800	Active TSS	HSMM	muscle
25	chr12:57913200-57914800	Active TSS	NH-A	brain
26	chr12:57913200-57915000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr12:57913200-57915000	Active TSS	iPS-20b Cell Line	embryonic stem cell
28	chr12:57913200-57915000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
29	chr12:57913200-57915000	Active TSS	Esophagus	oesophagus
30	chr12:57913400-57914600	Active TSS	Hela-S3	cervix
31	chr12:57913400-57914600	Active TSS	HMEC	breast
32	chr12:57913400-57914800	Active TSS	Primary T helper naive cells from peripheral blood	blood
33	chr12:57913400-57914800	Active TSS	Primary T killer memory cells from peripheral blood	blood
34	chr12:57913400-57914800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr12:57913400-57914800	Active TSS	Brain Hippocampus Middle	brain
36	chr12:57913400-57914800	Active TSS	Colon Smooth Muscle	Colon
37	chr12:57913400-57914800	Active TSS	Rectal Mucosa Donor 29	rectum
38	chr12:57913400-57914800	Active TSS	Stomach Mucosa	stomach
39	chr12:57913400-57914800	Active TSS	GM12878-XiMat	blood
40	chr12:57913400-57915000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr12:57913400-57915000	Active TSS	Pancreas	Pancrea
42	chr12:57913400-57915200	Active TSS	HUES48 Cell Line	embryonic stem cell
43	chr12:57913400-57915200	Active TSS	iPS-15b Cell Line	embryonic stem cell
44	chr12:57913400-57915200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
45	chr12:57913400-57915200	Active TSS	Fetal Kidney	kidney
46	chr12:57913400-57915400	Active TSS	Duodenum Smooth Muscle	Duodenum
47	chr12:57913400-57915600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr12:57913600-57914400	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr12:57913600-57914400	Active TSS	Placenta Amnion	Placenta Amnion
50	chr12:57913600-57914400	Active TSS	Spleen	Spleen

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links