Variant report

Variant rs2838892
Chromosome Location chr21:46771495-46771496
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46767200-46774000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
2 chr21:46767400-46772000 Enhancers Right Ventricle heart
3 chr21:46767600-46773000 Enhancers Left Ventricle heart
4 chr21:46767600-46773400 Enhancers Ovary ovary
5 chr21:46767600-46781000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr21:46767800-46775400 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr21:46768000-46773800 Enhancers Fetal Muscle Leg muscle
8 chr21:46768400-46774800 Weak transcription A549 lung
9 chr21:46768800-46772200 Enhancers Fetal Adrenal Gland Adrenal Gland
10 chr21:46768800-46772400 Enhancers Fetal Stomach stomach
11 chr21:46769000-46772600 Enhancers Spleen Spleen
12 chr21:46769400-46771600 Weak transcription Psoas Muscle Psoas
13 chr21:46769800-46772000 Enhancers Duodenum Smooth Muscle Duodenum
14 chr21:46769800-46772800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr21:46770000-46771800 Enhancers HepG2 liver
16 chr21:46770000-46772800 Enhancers Colonic Mucosa Colon
17 chr21:46770200-46784200 Weak transcription Placenta Amnion Placenta Amnion
18 chr21:46770400-46771800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr21:46770400-46775200 Weak transcription Fetal Intestine Small intestine
20 chr21:46770600-46771800 Enhancers Stomach Smooth Muscle stomach
21 chr21:46770600-46772000 Enhancers Adipose Nuclei Adipose
22 chr21:46770600-46772200 Weak transcription Brain Angular Gyrus brain
23 chr21:46770600-46773000 Weak transcription NHLF lung
24 chr21:46770600-46775800 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr21:46770800-46771800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr21:46770800-46771800 Weak transcription Right Atrium heart
27 chr21:46770800-46772600 Weak transcription NHDF-Ad bronchial
28 chr21:46770800-46773000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr21:46770800-46773000 Weak transcription Fetal Heart heart
30 chr21:46770800-46773000 Weak transcription Fetal Kidney kidney
31 chr21:46770800-46773400 Bivalent Enhancer Fetal Muscle Trunk muscle
32 chr21:46770800-46773800 Weak transcription Pancreas Pancrea
33 chr21:46770800-46773800 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
34 chr21:46770800-46775400 Weak transcription Gastric stomach
35 chr21:46770800-46785400 Weak transcription H9 Cell Line embryonic stem cell
36 chr21:46771000-46772200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
37 chr21:46771000-46772200 Enhancers Lung lung
38 chr21:46771200-46772600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr21:46771400-46772000 Enhancers Skeletal Muscle Female skeletal muscle
40 chr21:46771400-46772200 Enhancers Primary hematopoietic stem cells short term culture blood
41 chr21:46771400-46772200 Bivalent Enhancer Placenta Placenta
42 chr21:46771400-46773400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
43 chr21:46771400-46773800 Weak transcription Esophagus oesophagus
44 chr21:46771400-46774000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr21:46771400-46776600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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