Variant report

Variant rs2839004
Chromosome Location chr21:47240149-47240150
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47217800-47260400 Weak transcription Right Atrium heart
2 chr21:47218000-47240200 Weak transcription Pancreas Pancrea
3 chr21:47236400-47243800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr21:47237200-47241200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
5 chr21:47237200-47241400 Enhancers Primary neutrophils fromperipheralblood blood
6 chr21:47237400-47240200 Enhancers HepG2 liver
7 chr21:47237400-47240400 Weak transcription Fetal Kidney kidney
8 chr21:47237400-47240600 Enhancers Monocytes-CD14+_RO01746 blood
9 chr21:47237600-47240800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr21:47238000-47240400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr21:47238000-47240600 Enhancers Primary monocytes fromperipheralblood blood
12 chr21:47238000-47240600 Enhancers HMEC breast
13 chr21:47238200-47240600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
14 chr21:47238200-47240800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
15 chr21:47238200-47241000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr21:47238200-47241000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr21:47238200-47241000 Enhancers Primary T helper cells PMA-I stimulated --
18 chr21:47238200-47241000 Enhancers HSMM muscle
19 chr21:47238400-47241000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr21:47238400-47241000 Enhancers Muscle Satellite Cultured Cells --
21 chr21:47238400-47241600 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr21:47238600-47240800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr21:47238600-47241000 Enhancers Primary T helper 17 cells PMA-I stimulated --
24 chr21:47238600-47241000 Enhancers Fetal Muscle Leg muscle
25 chr21:47238600-47241000 Enhancers GM12878-XiMat blood
26 chr21:47238800-47241000 Bivalent Enhancer Primary T cells fromperipheralblood blood
27 chr21:47238800-47241000 Enhancers Primary T helper cells fromperipheralblood blood
28 chr21:47238800-47241000 Enhancers Brain Germinal Matrix brain
29 chr21:47238800-47241800 Enhancers Fetal Thymus thymus
30 chr21:47239000-47240200 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr21:47239000-47240200 Weak transcription Liver Liver
32 chr21:47239000-47240400 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr21:47239000-47240400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr21:47239000-47240600 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr21:47239000-47241000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
36 chr21:47239000-47241000 Enhancers Primary T helper naive cells fromperipheralblood blood
37 chr21:47239000-47241000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
38 chr21:47239000-47241000 Enhancers NH-A brain
39 chr21:47239000-47241200 Bivalent Enhancer Fetal Muscle Trunk muscle
40 chr21:47239200-47240200 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr21:47239200-47241000 Enhancers Fetal Brain Female brain
42 chr21:47239200-47241000 Enhancers Fetal Stomach stomach
43 chr21:47239200-47241000 Enhancers A549 lung
44 chr21:47239400-47240200 Weak transcription Duodenum Mucosa Duodenum
45 chr21:47239400-47240400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr21:47239400-47240400 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr21:47239400-47240600 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr21:47239400-47240600 Enhancers Fetal Intestine Large intestine
49 chr21:47239400-47241000 Enhancers Cortex derived primary cultured neurospheres brain
50 chr21:47239400-47241000 Enhancers Fetal Brain Male brain

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