Variant report

No.	Distal block	Cell Line	Cell type
1	chr15:82304110..82307325-chr15:82309106..82311280,4	K562	blood:
2	chr15:82296692..82300305-chr15:82304336..82308281,3	K562	blood:
3	chr15:82299189..82303626-chr15:82305712..82309080,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000259622	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1112988	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11637633	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12324764	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12592956	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13380097	0.82[AMR][1000 genomes]
rs1503065	0.85[AMR][1000 genomes]
rs1587706	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1963263	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1969091	0.81[AMR][1000 genomes]
rs4528531	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4778660	0.85[AMR][1000 genomes]
rs4778961	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6495636	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6495637	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6495638	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7163642	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7163710	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7164615	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7165730	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7179070	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833067	chr15:82234980-82450485	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
2	esv2422504	chr15:82293064-82426400	Strong transcription Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:82305800-82307600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
2	chr15:82306000-82307400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr15:82306000-82307400	Weak transcription	Fetal Muscle Leg	muscle
4	chr15:82306200-82307400	Weak transcription	Adipose Nuclei	Adipose

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