Variant report

Variant rs2844749
Chromosome Location chr6:30314116-30314117
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30312600-30314200 Active TSS iPS-20b Cell Line embryonic stem cell
2 chr6:30312800-30314200 Active TSS Hela-S3 cervix
3 chr6:30313400-30314200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
4 chr6:30313400-30314200 Enhancers Liver Liver
5 chr6:30313400-30314200 Enhancers Placenta Amnion Placenta Amnion
6 chr6:30313400-30314200 Flanking Active TSS Dnd41 blood
7 chr6:30313400-30314400 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr6:30313400-30321400 Weak transcription Spleen Spleen
9 chr6:30313600-30314200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr6:30313600-30314200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr6:30313600-30314200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr6:30313600-30314200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
13 chr6:30313600-30314200 Enhancers Primary Natural Killer cells fromperipheralblood blood
14 chr6:30313600-30314200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
15 chr6:30313600-30314200 Enhancers Gastric stomach
16 chr6:30313600-30314200 Weak transcription Ovary ovary
17 chr6:30313600-30314200 Flanking Active TSS Rectal Smooth Muscle rectum
18 chr6:30313600-30314200 Enhancers Small Intestine intestine
19 chr6:30313600-30314200 Flanking Active TSS HepG2 liver
20 chr6:30313600-30314400 Enhancers Esophagus oesophagus
21 chr6:30313600-30314400 Enhancers Pancreas Pancrea
22 chr6:30313600-30314400 Transcr. at gene 5' and 3' K562 blood
23 chr6:30313800-30314200 Genic enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr6:30313800-30314200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr6:30313800-30314200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
26 chr6:30313800-30314200 Genic enhancers Primary B cells from peripheral blood blood
27 chr6:30313800-30314200 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr6:30313800-30314200 Enhancers Primary T helper naive cells fromperipheralblood blood
29 chr6:30313800-30314200 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr6:30313800-30314200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr6:30313800-30314200 Weak transcription Fetal Muscle Trunk muscle
32 chr6:30313800-30314200 Enhancers Psoas Muscle Psoas
33 chr6:30313800-30314400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
34 chr6:30313800-30314400 Genic enhancers Fetal Muscle Leg muscle
35 chr6:30313800-30314400 Enhancers Left Ventricle heart
36 chr6:30313800-30314400 Enhancers Right Ventricle heart
37 chr6:30313800-30314600 Enhancers Primary T helper cells fromperipheralblood blood
38 chr6:30313800-30316400 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr6:30313800-30325600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr6:30314000-30314200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr6:30314000-30314200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr6:30314000-30314200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr6:30314000-30314200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr6:30314000-30314200 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr6:30314000-30314200 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr6:30314000-30314200 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr6:30314000-30314200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr6:30314000-30314200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr6:30314000-30314200 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr6:30314000-30314200 Genic enhancers Primary B cells from cord blood blood

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