Variant report

Variant rs28450445
Chromosome Location chr15:59638930-59638931
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:59623200-59662800 Weak transcription Stomach Smooth Muscle stomach
2 chr15:59623400-59641200 Weak transcription Aorta Aorta
3 chr15:59623400-59643800 Weak transcription Lung lung
4 chr15:59624600-59650000 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr15:59626400-59641400 Weak transcription HUVEC blood vessel
6 chr15:59626400-59642400 Weak transcription Pancreas Pancrea
7 chr15:59628600-59639200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr15:59631800-59641600 Weak transcription HSMM muscle
9 chr15:59631800-59641800 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr15:59632000-59641600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr15:59632000-59641600 Weak transcription NH-A brain
12 chr15:59632000-59642200 Weak transcription Left Ventricle heart
13 chr15:59632000-59643600 Weak transcription Brain Cingulate Gyrus brain
14 chr15:59632200-59641400 Weak transcription Muscle Satellite Cultured Cells --
15 chr15:59632400-59639200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr15:59632600-59639200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr15:59632600-59641400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr15:59632800-59639400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr15:59632800-59640200 Weak transcription HMEC breast
20 chr15:59633000-59641200 Weak transcription NHLF lung
21 chr15:59633200-59639400 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr15:59634400-59641800 Weak transcription Brain Hippocampus Middle brain
23 chr15:59634600-59640800 Genic enhancers A549 lung
24 chr15:59634800-59662600 Weak transcription Colonic Mucosa Colon
25 chr15:59636400-59652800 Weak transcription HepG2 liver
26 chr15:59636600-59643600 Weak transcription Primary B cells from cord blood blood
27 chr15:59636800-59640200 Weak transcription Psoas Muscle Psoas
28 chr15:59636800-59642000 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr15:59636800-59642200 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr15:59636800-59642200 Genic enhancers Hela-S3 cervix
31 chr15:59636800-59642600 Weak transcription Fetal Intestine Small intestine
32 chr15:59637000-59641800 Weak transcription Placenta Placenta
33 chr15:59637000-59642400 Weak transcription Spleen Spleen
34 chr15:59637200-59639200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr15:59637600-59640400 Genic enhancers GM12878-XiMat blood
36 chr15:59637600-59640600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr15:59637800-59639200 Enhancers Brain Substantia Nigra brain
38 chr15:59637800-59641600 Weak transcription NHDF-Ad bronchial
39 chr15:59637800-59645200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
40 chr15:59637800-59662000 Weak transcription Right Ventricle heart
41 chr15:59638200-59639800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
42 chr15:59638200-59641400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr15:59638400-59639200 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr15:59638400-59639800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
45 chr15:59638400-59640200 Weak transcription Primary B cells from peripheral blood blood
46 chr15:59638400-59641600 Weak transcription Osteobl bone
47 chr15:59638400-59642000 Weak transcription Fetal Intestine Large intestine
48 chr15:59638600-59639000 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr15:59638600-59639000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr15:59638600-59639600 Weak transcription HUES64 Cell Line embryonic stem cell

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