The 2.0 version of rSNPBase

Variant report

Variant rs28451202
Chromosome Location chr4:77130707-77130708
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:77113200-77134000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr4:77113600-77134200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr4:77117000-77134000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr4:77117400-77132800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr4:77121400-77132800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr4:77121400-77133600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr4:77121400-77134000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr4:77121600-77131000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr4:77122200-77130800 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr4:77122400-77133600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr4:77127000-77130800 Enhancers Placenta Placenta
12 chr4:77127000-77131600 Enhancers Fetal Heart heart
13 chr4:77127800-77130800 Enhancers Fetal Muscle Leg muscle
14 chr4:77128400-77133200 Weak transcription Placenta Amnion Placenta Amnion
15 chr4:77128600-77133000 Enhancers Fetal Adrenal Gland Adrenal Gland
16 chr4:77128800-77133400 Enhancers Primary T helper cells fromperipheralblood blood
17 chr4:77128800-77133600 Enhancers Small Intestine intestine
18 chr4:77129600-77131200 Enhancers Esophagus oesophagus
19 chr4:77129600-77131200 Enhancers Sigmoid Colon Sigmoid Colon
20 chr4:77129600-77131800 Enhancers Pancreas Pancrea
21 chr4:77129800-77132800 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr4:77129800-77133400 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr4:77130000-77130800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr4:77130000-77131000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr4:77130000-77131200 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr4:77130000-77131200 Enhancers Left Ventricle heart
27 chr4:77130000-77131200 Enhancers Lung lung
28 chr4:77130000-77131400 Enhancers Primary monocytes fromperipheralblood blood
29 chr4:77130000-77131400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr4:77130000-77131600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr4:77130000-77131600 Enhancers Fetal Brain Female brain
32 chr4:77130000-77132600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
33 chr4:77130200-77130800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr4:77130200-77130800 Weak transcription Aorta Aorta
35 chr4:77130200-77130800 Enhancers Brain Cingulate Gyrus brain
36 chr4:77130200-77130800 Enhancers Brain Substantia Nigra brain
37 chr4:77130200-77130800 Weak transcription Fetal Muscle Trunk muscle
38 chr4:77130200-77130800 Enhancers Fetal Stomach stomach
39 chr4:77130200-77130800 Weak transcription Gastric stomach
40 chr4:77130200-77130800 Enhancers Rectal Mucosa Donor 31 rectum
41 chr4:77130200-77130800 Enhancers Skeletal Muscle Male skeletal muscle
42 chr4:77130200-77130800 Enhancers Skeletal Muscle Female skeletal muscle
43 chr4:77130200-77130800 Strong transcription Dnd41 blood
44 chr4:77130200-77131000 Enhancers Primary hematopoietic stem cells blood
45 chr4:77130200-77131000 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr4:77130200-77131000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr4:77130200-77131000 Enhancers Adipose Nuclei Adipose
48 chr4:77130200-77131000 Enhancers Brain Anterior Caudate brain
49 chr4:77130200-77131000 Weak transcription Brain Germinal Matrix brain
50 chr4:77130200-77131000 Enhancers Brain Dorsolateral Prefrontal Cortex brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015