Variant report

Variant rs28456342
Chromosome Location chr1:153509120-153509121
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:153505800-153509200 Active TSS Aorta Aorta
2 chr1:153505800-153509400 Flanking Active TSS Adipose Nuclei Adipose
3 chr1:153506800-153509200 Flanking Active TSS Primary B cells from cord blood blood
4 chr1:153507000-153509200 Active TSS Pancreatic Islets Pancreatic Islet
5 chr1:153507000-153509400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr1:153507200-153509200 Flanking Active TSS Fetal Muscle Trunk muscle
7 chr1:153507400-153509400 Flanking Active TSS Primary hematopoietic stem cells blood
8 chr1:153507400-153509600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr1:153507600-153509200 Flanking Active TSS Fetal Thymus thymus
10 chr1:153507600-153509400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
11 chr1:153507600-153509400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr1:153507600-153509400 Flanking Active TSS Brain Inferior Temporal Lobe brain
13 chr1:153507600-153509400 Flanking Active TSS Esophagus oesophagus
14 chr1:153507800-153509200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
15 chr1:153507800-153509200 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
16 chr1:153507800-153509200 Active TSS Ovary ovary
17 chr1:153508000-153509200 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
18 chr1:153508200-153509600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
19 chr1:153508400-153509200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
20 chr1:153508400-153509200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
21 chr1:153508600-153509200 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
22 chr1:153508600-153509200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:153508600-153509200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
24 chr1:153508600-153509200 Flanking Active TSS Fetal Muscle Leg muscle
25 chr1:153508600-153509200 Flanking Active TSS Pancreas Pancrea
26 chr1:153508600-153509200 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
27 chr1:153508600-153509200 Flanking Active TSS HMEC breast
28 chr1:153508600-153509200 Flanking Active TSS K562 blood
29 chr1:153508600-153509400 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
30 chr1:153508600-153509400 Flanking Active TSS Primary T cells fromperipheralblood blood
31 chr1:153508600-153509400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
32 chr1:153508600-153509400 Flanking Active TSS Muscle Satellite Cultured Cells --
33 chr1:153508600-153509400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:153508600-153509400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
35 chr1:153508600-153509400 Flanking Active TSS GM12878-XiMat blood
36 chr1:153508600-153509400 Flanking Active TSS NHEK skin
37 chr1:153508600-153511600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:153508800-153509200 Flanking Bivalent TSS/Enh HUES48 Cell Line embryonic stem cell
39 chr1:153508800-153509200 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
40 chr1:153508800-153509200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr1:153508800-153509200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr1:153508800-153509200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:153508800-153509200 Flanking Active TSS Primary B cells from peripheral blood blood
44 chr1:153508800-153509200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
45 chr1:153508800-153509200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
46 chr1:153508800-153509200 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
47 chr1:153508800-153509200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:153508800-153509200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
49 chr1:153508800-153509200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
50 chr1:153508800-153509200 Flanking Active TSS Brain Angular Gyrus brain

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