The 2.0 version of rSNPBase

Variant report

Variant rs28460220
Chromosome Location chr8:59728586-59728587
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59714200-59731200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr8:59714400-59731800 Weak transcription Right Atrium heart
3 chr8:59714600-59746000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr8:59715000-59731200 Weak transcription Pancreas Pancrea
5 chr8:59715000-59735600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr8:59715000-59742400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr8:59715200-59757400 Weak transcription Fetal Intestine Large intestine
8 chr8:59720600-59736800 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr8:59720600-59738200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr8:59720600-59754800 Weak transcription Small Intestine intestine
11 chr8:59720800-59729400 Weak transcription Fetal Lung lung
12 chr8:59720800-59739000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr8:59720800-59745200 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr8:59720800-59762600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr8:59721000-59728600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr8:59721000-59731200 Weak transcription Fetal Kidney kidney
17 chr8:59721000-59735000 Weak transcription Rectal Smooth Muscle rectum
18 chr8:59721000-59739000 Weak transcription NHLF lung
19 chr8:59721000-59739200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr8:59721000-59745000 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr8:59721400-59732400 Weak transcription Colon Smooth Muscle Colon
22 chr8:59721400-59745000 Weak transcription Fetal Brain Male brain
23 chr8:59721600-59730000 Strong transcription Fetal Thymus thymus
24 chr8:59721600-59736400 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr8:59721600-59736800 Weak transcription Brain Germinal Matrix brain
26 chr8:59721600-59745400 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr8:59722000-59737800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr8:59722200-59734000 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr8:59722400-59729800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr8:59722400-59757200 Strong transcription Dnd41 blood
31 chr8:59724200-59729200 Weak transcription Osteobl bone
32 chr8:59724200-59731000 Weak transcription Colonic Mucosa Colon
33 chr8:59724200-59733000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr8:59724400-59731400 Strong transcription Primary T cells from cord blood blood
35 chr8:59724600-59738800 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr8:59724800-59728600 Strong transcription Cortex derived primary cultured neurospheres brain
37 chr8:59724800-59729200 Weak transcription HUVEC blood vessel
38 chr8:59724800-59729800 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr8:59724800-59730200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr8:59724800-59732800 Weak transcription Muscle Satellite Cultured Cells --
41 chr8:59725400-59729800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr8:59725400-59730200 Strong transcription HUES48 Cell Line embryonic stem cell
43 chr8:59725800-59729800 Strong transcription Primary hematopoietic stem cells blood
44 chr8:59725800-59729800 Strong transcription Rectal Mucosa Donor 31 rectum
45 chr8:59726600-59734800 Weak transcription Esophagus oesophagus
46 chr8:59727000-59745400 Weak transcription H9 Cell Line embryonic stem cell
47 chr8:59727600-59729600 Strong transcription Stomach Smooth Muscle stomach
48 chr8:59727800-59729600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr8:59727800-59729600 Strong transcription Fetal Intestine Small intestine
50 chr8:59727800-59729800 Strong transcription Thymus Thymus

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Last update: Aug 31, 2015