Variant report

Variant	rs2846222
Chromosome Location	chr11:105901259-105901260
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10160360	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1939784	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1939802	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1939822	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1940789	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1940791	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1940792	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2155343	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2847184	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57384125	0.86[ASN][1000 genomes]
rs6591149	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105900600-105902400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr11:105901000-105902000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr11:105901200-105902000	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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