The 2.0 version of rSNPBase

Variant report

Variant rs284647
Chromosome Location chr19:41925411-41925412
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41905000-41930800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr19:41905200-41926600 Weak transcription Small Intestine intestine
3 chr19:41913600-41925800 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr19:41913800-41927000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr19:41913800-41932600 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr19:41915200-41932600 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr19:41915400-41932800 Weak transcription Hela-S3 cervix
8 chr19:41915600-41932800 Weak transcription NH-A brain
9 chr19:41916000-41932000 Strong transcription Fetal Stomach stomach
10 chr19:41916000-41932400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr19:41916200-41926200 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr19:41916200-41927000 Strong transcription Placenta Placenta
13 chr19:41916200-41928000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr19:41916200-41932000 Weak transcription HUVEC blood vessel
15 chr19:41916400-41928400 Weak transcription K562 blood
16 chr19:41916400-41930800 Strong transcription Primary T helper cells fromperipheralblood blood
17 chr19:41916400-41931600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr19:41916400-41932000 Strong transcription Primary T helper naive cells fromperipheralblood blood
19 chr19:41916400-41932600 Strong transcription Primary B cells from peripheral blood blood
20 chr19:41916400-41932800 Strong transcription Brain Germinal Matrix brain
21 chr19:41916400-41932800 Strong transcription Fetal Brain Female brain
22 chr19:41916400-41933000 Strong transcription Thymus Thymus
23 chr19:41916600-41925600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr19:41916600-41926800 Strong transcription Fetal Thymus thymus
25 chr19:41916600-41929600 Strong transcription Colon Smooth Muscle Colon
26 chr19:41916600-41930200 Strong transcription Primary T cells fromperipheralblood blood
27 chr19:41916600-41930800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
28 chr19:41916600-41931200 Strong transcription Rectal Smooth Muscle rectum
29 chr19:41916600-41931400 Strong transcription Primary T regulatory cells fromperipheralblood blood
30 chr19:41916800-41925600 Strong transcription Primary hematopoietic stem cells short term culture blood
31 chr19:41916800-41925800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr19:41916800-41926000 Strong transcription Stomach Smooth Muscle stomach
33 chr19:41916800-41926600 Strong transcription Sigmoid Colon Sigmoid Colon
34 chr19:41916800-41930600 Strong transcription Duodenum Smooth Muscle Duodenum
35 chr19:41916800-41932200 Strong transcription Primary T cells from cord blood blood
36 chr19:41916800-41932200 Strong transcription Ovary ovary
37 chr19:41917000-41927200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr19:41917000-41932000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr19:41918200-41927600 Strong transcription Brain Anterior Caudate brain
40 chr19:41918200-41932000 Weak transcription NHEK skin
41 chr19:41918200-41932200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr19:41918200-41932400 Weak transcription Right Atrium heart
43 chr19:41918200-41932800 Strong transcription Brain Hippocampus Middle brain
44 chr19:41918400-41932800 Strong transcription Brain Cingulate Gyrus brain
45 chr19:41918600-41932400 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr19:41918600-41932800 Strong transcription Brain Angular Gyrus brain
47 chr19:41918800-41931600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr19:41918800-41932600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr19:41918800-41932800 Strong transcription Brain Inferior Temporal Lobe brain
50 chr19:41919000-41929400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015