Variant report

Variant rs2846861
Chromosome Location chr11:65222305-65222306
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:65212800-65222400 Weak transcription Stomach Mucosa stomach
2 chr11:65220400-65227000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr11:65221400-65222400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr11:65221600-65222400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
5 chr11:65221600-65222800 Active TSS H9 Cell Line embryonic stem cell
6 chr11:65221600-65222800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr11:65221800-65222400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr11:65221800-65222400 Flanking Active TSS HepG2 liver
9 chr11:65221800-65222600 Enhancers Spleen Spleen
10 chr11:65221800-65222800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr11:65221800-65222800 Active TSS Colonic Mucosa Colon
12 chr11:65221800-65222800 Active TSS Rectal Smooth Muscle rectum
13 chr11:65221800-65222800 Flanking Active TSS Osteobl bone
14 chr11:65221800-65223200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr11:65221800-65223200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr11:65221800-65223200 Flanking Active TSS Stomach Smooth Muscle stomach
17 chr11:65221800-65223200 Flanking Active TSS HSMM muscle
18 chr11:65221800-65223200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
19 chr11:65221800-65225400 Active TSS GM12878-XiMat blood
20 chr11:65222000-65222400 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
21 chr11:65222000-65222400 Flanking Active TSS Primary T cells from cord blood blood
22 chr11:65222000-65222400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
23 chr11:65222000-65222400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
24 chr11:65222000-65222400 Active TSS Brain Anterior Caudate brain
25 chr11:65222000-65222400 Enhancers Fetal Brain Male brain
26 chr11:65222000-65222400 Flanking Active TSS Fetal Intestine Large intestine
27 chr11:65222000-65222400 Flanking Active TSS Fetal Intestine Small intestine
28 chr11:65222000-65222400 Flanking Active TSS Fetal Lung lung
29 chr11:65222000-65222400 Flanking Active TSS Fetal Stomach stomach
30 chr11:65222000-65222400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
31 chr11:65222000-65222400 Flanking Active TSS Thymus Thymus
32 chr11:65222000-65222400 Flanking Active TSS HSMMtube muscle
33 chr11:65222000-65222400 Flanking Active TSS K562 blood
34 chr11:65222000-65222800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
35 chr11:65222000-65222800 Active TSS Aorta Aorta
36 chr11:65222000-65222800 Active TSS Brain Hippocampus Middle brain
37 chr11:65222000-65222800 Active TSS Brain Inferior Temporal Lobe brain
38 chr11:65222000-65222800 Active TSS Duodenum Smooth Muscle Duodenum
39 chr11:65222000-65222800 Active TSS Psoas Muscle Psoas
40 chr11:65222000-65222800 Active TSS A549 lung
41 chr11:65222000-65223000 Flanking Active TSS Primary monocytes fromperipheralblood blood
42 chr11:65222000-65223000 Flanking Active TSS Primary T cells fromperipheralblood blood
43 chr11:65222000-65223000 Flanking Active TSS Primary hematopoietic stem cells blood
44 chr11:65222000-65223000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
45 chr11:65222000-65223000 Active TSS Brain Germinal Matrix brain
46 chr11:65222000-65223000 Flanking Active TSS HUVEC blood vessel
47 chr11:65222000-65223000 Flanking Active TSS NHEK skin
48 chr11:65222000-65223200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
49 chr11:65222000-65223200 Flanking Active TSS Primary B cells from cord blood blood
50 chr11:65222000-65223200 Flanking Active TSS Primary B cells from peripheral blood blood

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