The 2.0 version of rSNPBase

Variant report

Variant rs28480636
Chromosome Location chr15:92686345-92686346
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:92645200-92705600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr15:92648200-92692600 Weak transcription NHLF lung
3 chr15:92649200-92710800 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr15:92657000-92690200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr15:92661000-92703600 Weak transcription Small Intestine intestine
6 chr15:92664000-92707000 Weak transcription Liver Liver
7 chr15:92664000-92712000 Weak transcription Psoas Muscle Psoas
8 chr15:92665200-92689000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr15:92666000-92704200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr15:92668200-92690200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr15:92668600-92690800 Weak transcription Brain Angular Gyrus brain
12 chr15:92669600-92703000 Weak transcription Brain Anterior Caudate brain
13 chr15:92671600-92708000 Weak transcription Gastric stomach
14 chr15:92671800-92707800 Weak transcription Colonic Mucosa Colon
15 chr15:92671800-92709200 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr15:92672000-92704200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr15:92672200-92695600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr15:92672200-92703200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr15:92672400-92689600 Weak transcription Fetal Stomach stomach
20 chr15:92672600-92690200 Weak transcription Spleen Spleen
21 chr15:92672600-92691200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr15:92672800-92687000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr15:92672800-92687200 Weak transcription Primary hematopoietic stem cells blood
24 chr15:92673400-92692600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr15:92674000-92687000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr15:92674000-92690000 Weak transcription Stomach Smooth Muscle stomach
27 chr15:92674800-92707800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr15:92676600-92689200 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr15:92676600-92689800 Weak transcription Primary T cells from cord blood blood
30 chr15:92676800-92690200 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr15:92678600-92689600 Weak transcription Aorta Aorta
32 chr15:92678600-92692400 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr15:92678600-92701000 Weak transcription H9 Cell Line embryonic stem cell
34 chr15:92679000-92689600 Weak transcription Esophagus oesophagus
35 chr15:92679200-92689200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr15:92679200-92689400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr15:92679200-92689600 Weak transcription Lung lung
38 chr15:92679200-92698800 Weak transcription Thymus Thymus
39 chr15:92679400-92687000 Weak transcription Fetal Thymus thymus
40 chr15:92679400-92689600 Weak transcription Adipose Nuclei Adipose
41 chr15:92679400-92690200 Weak transcription Ovary ovary
42 chr15:92679600-92690200 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr15:92679800-92689400 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr15:92683800-92690200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr15:92684000-92713200 Strong transcription Monocytes-CD14+_RO01746 blood
46 chr15:92684200-92687800 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr15:92684200-92688600 Enhancers Left Ventricle heart
48 chr15:92684200-92701400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
49 chr15:92684400-92687800 Enhancers Placenta Amnion Placenta Amnion
50 chr15:92684400-92713200 Strong transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015