Variant report

Variant	rs28491707
Chromosome Location	chr4:100971240-100971241
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs28483464	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427689	chr4:100931741-101216531	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100970600-100971400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr4:100970600-100971600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr4:100970600-100971800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr4:100970800-100971400	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr4:100970800-100971600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr4:100970800-100971600	Enhancers	NH-A	brain
7	chr4:100971000-100971400	Enhancers	HMEC	breast
8	chr4:100971000-100971600	Enhancers	NHEK	skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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