The 2.0 version of rSNPBase

Variant report

Variant rs28492872
Chromosome Location chr4:95532453-95532454
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:95489600-95539200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr4:95493200-95540200 Weak transcription Small Intestine intestine
3 chr4:95493200-95584800 Weak transcription Primary B cells from cord blood blood
4 chr4:95497200-95553000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr4:95497200-95569400 Weak transcription Esophagus oesophagus
6 chr4:95497400-95542000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr4:95497600-95539200 Weak transcription HepG2 liver
8 chr4:95507200-95548200 Weak transcription Psoas Muscle Psoas
9 chr4:95507200-95548600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr4:95507800-95539200 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr4:95511200-95554800 Weak transcription NHDF-Ad bronchial
12 chr4:95513000-95539000 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr4:95514200-95539200 Weak transcription Fetal Muscle Leg muscle
14 chr4:95514400-95539200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr4:95514400-95544600 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr4:95514600-95539200 Weak transcription Stomach Smooth Muscle stomach
17 chr4:95514600-95542600 Weak transcription NHEK skin
18 chr4:95514800-95539000 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr4:95515000-95538600 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr4:95515000-95562000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr4:95521600-95544400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr4:95522200-95538200 Weak transcription Placenta Placenta
23 chr4:95525000-95533600 Weak transcription Gastric stomach
24 chr4:95525000-95538600 Weak transcription Fetal Intestine Small intestine
25 chr4:95525000-95538600 Weak transcription Right Ventricle heart
26 chr4:95525000-95539200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr4:95525000-95539200 Weak transcription Fetal Muscle Trunk muscle
28 chr4:95525000-95569600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr4:95525000-95586400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr4:95525000-95590000 Weak transcription Lung lung
31 chr4:95525400-95539200 Weak transcription HSMMtube muscle
32 chr4:95525400-95562200 Weak transcription NHLF lung
33 chr4:95526600-95539000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr4:95526600-95539200 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr4:95526600-95539200 Weak transcription Ovary ovary
36 chr4:95526600-95544800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr4:95526800-95533600 Weak transcription Colon Smooth Muscle Colon
38 chr4:95526800-95534200 Weak transcription Brain Substantia Nigra brain
39 chr4:95526800-95539000 Weak transcription Adipose Nuclei Adipose
40 chr4:95526800-95539200 Weak transcription Rectal Smooth Muscle rectum
41 chr4:95526800-95551000 Weak transcription Brain Anterior Caudate brain
42 chr4:95527800-95592200 Weak transcription Pancreas Pancrea
43 chr4:95528000-95555000 Weak transcription Aorta Aorta
44 chr4:95528400-95533800 Strong transcription HUVEC blood vessel
45 chr4:95528800-95532800 Strong transcription HSMM muscle
46 chr4:95528800-95532800 Strong transcription Osteobl bone
47 chr4:95529000-95532600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr4:95529400-95534000 Strong transcription NH-A brain
49 chr4:95531200-95532600 Strong transcription Breast Myoepithelial Primary Cells Breast
50 chr4:95531200-95532600 Enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015