The 2.0 version of rSNPBase

Variant report

Variant rs28497963
Chromosome Location chr4:99402195-99402196
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:99389200-99403600 Weak transcription HUES6 Cell Line embryonic stem cell
2 chr4:99389200-99404000 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr4:99389200-99404000 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr4:99389200-99404000 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr4:99389200-99404200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr4:99389200-99407000 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr4:99389200-99413000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr4:99389400-99402800 Weak transcription A549 lung
9 chr4:99389400-99403000 Weak transcription Fetal Kidney kidney
10 chr4:99389400-99403200 Weak transcription Primary hematopoietic stem cells blood
11 chr4:99389400-99403800 Weak transcription Primary B cells from peripheral blood blood
12 chr4:99389400-99419800 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr4:99390000-99405000 Weak transcription Fetal Intestine Small intestine
14 chr4:99390200-99402200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr4:99390200-99402400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr4:99390200-99404000 Weak transcription Spleen Spleen
17 chr4:99390200-99404200 Weak transcription H1 Cell Line embryonic stem cell
18 chr4:99390200-99405400 Weak transcription Left Ventricle heart
19 chr4:99390800-99413200 Weak transcription Brain Anterior Caudate brain
20 chr4:99392000-99404600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr4:99392200-99402400 Weak transcription HSMMtube muscle
22 chr4:99392200-99402800 Strong transcription Cortex derived primary cultured neurospheres brain
23 chr4:99392600-99403600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr4:99392600-99408600 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr4:99392600-99411800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr4:99394000-99403200 Weak transcription HUVEC blood vessel
27 chr4:99394000-99413200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr4:99394200-99403200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr4:99396200-99431400 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr4:99396400-99412400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr4:99396800-99403400 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr4:99397000-99403200 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr4:99397600-99439400 Weak transcription Primary B cells from cord blood blood
34 chr4:99398000-99407600 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr4:99398800-99403800 Weak transcription Primary T cells fromperipheralblood blood
36 chr4:99399600-99404000 Weak transcription Thymus Thymus
37 chr4:99399600-99407600 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr4:99399800-99402200 Weak transcription Fetal Brain Female brain
39 chr4:99400000-99402200 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr4:99400000-99402800 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
41 chr4:99400000-99403000 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr4:99400000-99404200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr4:99400000-99406000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr4:99400000-99406000 Enhancers HMEC breast
45 chr4:99400000-99406200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr4:99400000-99406400 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr4:99400000-99412600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr4:99400000-99429800 Weak transcription Fetal Muscle Trunk muscle
49 chr4:99400200-99403800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr4:99400200-99404000 Weak transcription NHLF lung

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Last update: Aug 31, 2015