Variant report

Variant	rs28536019
Chromosome Location	chr4:986484-986485
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr4:986249-986836	MCF-7	breast:	n/a	n/a
2	JUND	chr4:986210-987957	K562	blood:	n/a	chr4:986228-986239 chr4:987268-987276 chr4:987268-987276 chr4:987267-987277 chr4:987266-987277 chr4:987269-987276 chr4:987266-987278 chr4:987440-987449
3	MBD4	chr4:986231-987492	HepG2	liver:	n/a	n/a
4	TCF12	chr4:986313-986749	HepG2	liver:	n/a	n/a
5	POLR2A	chr4:986359-986592	A549	lung:	n/a	n/a
6	PML	chr4:986343-986775	K562	blood:	n/a	n/a
7	CBX3	chr4:986170-986843	K562	blood:	n/a	n/a
8	USF2	chr4:986343-986740	K562	blood:	n/a	chr4:986452-986468
9	E2F6	chr4:986324-986970	K562	blood:	n/a	n/a
10	RFX5	chr4:986324-986782	Hela-S3	cervix:	n/a	n/a
11	MYBL2	chr4:986170-988117	HepG2	liver:	n/a	n/a
12	YY1	chr4:986188-986635	K562	blood:	n/a	n/a
13	UBTF	chr4:986279-986842	K562	blood:	n/a	n/a
14	NR3C1	chr4:986389-986908	A549	lung:	n/a	chr4:986425-986438 chr4:986667-986682
15	USF1	chr4:986344-986772	A549	lung:	n/a	chr4:986452-986468
16	EP300	chr4:986333-986821	HepG2	liver:	n/a	chr4:986421-986428
17	POLR2A	chr4:986167-986874	K562	blood:	n/a	n/a
18	MYC	chr4:986389-986587	MCF-7	breast:	n/a	n/a
19	YY1	chr4:985954-986953	HepG2	liver:	n/a	n/a
20	MYBL2	chr4:986165-988110	HepG2	liver:	n/a	n/a
21	FOXA1	chr4:986346-986843	HepG2	liver:	n/a	n/a
22	POLR2A	chr4:986202-987733	HepG2	liver:	n/a	n/a
23	POLR2A	chr4:984519-988665	HepG2	liver:	n/a	n/a
24	SP1	chr4:986194-986918	HepG2	liver:	n/a	n/a
25	ELF1	chr4:986330-986653	HepG2	liver:	n/a	chr4:986487-986500
26	TEAD4	chr4:986252-987093	K562	blood:	n/a	n/a
27	HDAC2	chr4:986287-986868	HepG2	liver:	n/a	n/a
28	BHLHE40	chr4:986365-986679	HepG2	liver:	n/a	chr4:986452-986468
29	NR2F2	chr4:986270-986762	K562	blood:	n/a	n/a
30	POLR2A	chr4:986249-986716	GM12892	blood:	n/a	n/a
31	BHLHE40	chr4:986236-986870	HepG2	liver:	n/a	chr4:986452-986468
32	HNF4A	chr4:986270-987942	HepG2	liver:	n/a	chr4:986652-986667 chr4:987719-987726 chr4:987231-987246 chr4:986501-986513 chr4:986652-986667 chr4:987012-987020 chr4:987679-987687 chr4:987714-987730 chr4:987230-987238
33	POLR2A	chr4:986348-987858	HepG2	liver:	n/a	n/a
34	MYC	chr4:986299-986917	HepG2	liver:	n/a	n/a
35	POLR2A	chr4:986278-986888	PANC-1	pancreas:	n/a	n/a
36	POLR2A	chr4:985774-988000	HepG2	liver:	n/a	n/a
37	CEBPB	chr4:986403-986820	HepG2	liver:	n/a	n/a
38	POLR2A	chr4:986275-986809	Hela-S3	cervix:	n/a	n/a
39	MAX	chr4:985534-988103	HepG2	liver:	n/a	chr4:987267-987276 chr4:987442-987452
40	YY1	chr4:986240-986485	A549	lung:	n/a	n/a
41	ELF1	chr4:986311-986752	K562	blood:	n/a	chr4:986487-986500
42	POLR2A	chr4:986303-986678	PANC-1	pancreas:	n/a	n/a
43	POLR2A	chr4:985807-987858	HepG2	liver:	n/a	n/a
44	MAX	chr4:986266-987820	HepG2	liver:	n/a	chr4:987267-987276 chr4:987442-987452
45	USF1	chr4:986325-986730	A549	lung:	n/a	chr4:986452-986468
46	TAF1	chr4:986326-986764	Hela-S3	cervix:	n/a	n/a
47	TAL1	chr4:986253-986725	K562	blood:	n/a	n/a
48	USF1	chr4:986327-986779	A549	lung:	n/a	chr4:986452-986468
49	POLR2A	chr4:986272-987813	HepG2	liver:	n/a	n/a
50	MXI1	chr4:986365-986766	Hela-S3	cervix:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:923280..928378-chr4:984909..989379,9	K562	blood:
2	chr4:951436..960651-chr4:984851..992991,17	MCF-7	breast:
3	chr4:925225..929223-chr4:985545..988654,6	MCF-7	breast:
4	chr4:966033..968981-chr4:985049..988965,5	MCF-7	breast:
5	chr4:984860..987749-chr4:1337412..1341360,3	MCF-7	breast:
6	chr4:667692..669687-chr4:985576..987160,2	K562	blood:
7	chr4:680689..682702-chr4:985061..987897,2	K562	blood:

Variant related genes	Relation type
SLC26A1	TF binding region
ENSG00000169020	Chromatin interaction
ENSG00000169026	Chromatin interaction
ENSG00000215375	Chromatin interaction
ENSG00000178950	Chromatin interaction
ENSG00000145214	Chromatin interaction
ENSG00000127419	Chromatin interaction
ENSG00000163945	Chromatin interaction

Extended variants
information (count: 78 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs28392476	0.84[AFR][1000 genomes]
rs36084010	0.98[AFR][1000 genomes]
rs58780485	1.00[AFR][1000 genomes]
rs59758572	0.88[AFR][1000 genomes]
rs73792078	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:73 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv822425	chr4:540105-1413799	Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
2	nsv530490	chr4:614355-1399150	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
3	esv1829397	chr4:655939-1041957	Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
4	nsv878255	chr4:708932-1052488	Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
5	nsv878258	chr4:712222-1058358	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
6	nsv878260	chr4:713920-1052488	Bivalent Enhancer Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
7	nsv878261	chr4:756686-1047794	Active TSS Genic enhancers Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
8	nsv1003219	chr4:769894-1105464	Strong transcription Weak transcription Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
9	nsv878263	chr4:771587-1047794	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
10	nsv432547	chr4:782301-1053930	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
11	nsv878264	chr4:790757-1047794	Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Active TSS Bivalent/Poised TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
12	nsv878265	chr4:793929-1024752	Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
13	nsv878266	chr4:793929-1058358	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
14	nsv878269	chr4:795890-1024752	Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
15	nsv878270	chr4:798962-1024752	Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
16	nsv469998	chr4:809593-1087531	Strong transcription Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
17	nsv878272	chr4:809787-1058358	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
18	nsv1008352	chr4:813393-1035416	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
19	nsv878276	chr4:813393-1047794	Genic enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
20	nsv878277	chr4:813393-1087531	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
21	nsv1012895	chr4:827866-1054874	Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
22	nsv536979	chr4:827866-1054874	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
23	nsv536980	chr4:827866-1167377	Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
24	nsv878280	chr4:828148-1052488	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
25	nsv878283	chr4:862156-1052488	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
26	nsv878285	chr4:891098-1052488	Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
27	nsv1009619	chr4:901897-1215657	Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
28	nsv1003876	chr4:927509-1191316	Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
29	nsv1000381	chr4:927509-1198766	Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
30	nsv870410	chr4:927839-1090974	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
31	nsv878286	chr4:928684-994414	Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
32	nsv878287	chr4:928684-1001447	Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
33	esv1838544	chr4:939883-1004463	Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
34	nsv878288	chr4:939883-1019011	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
35	nsv878289	chr4:939883-1047794	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
36	nsv878290	chr4:939883-1052488	Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
37	nsv878291	chr4:939883-1058358	Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
38	nsv878292	chr4:939883-1087531	Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
39	nsv878293	chr4:941518-1047794	Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
40	nsv878294	chr4:941518-1052488	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
41	nsv878295	chr4:941518-1064116	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
42	esv1846290	chr4:941518-1081307	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
43	nsv461149	chr4:942006-1019011	Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
44	nsv593226	chr4:942006-1019011	Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
45	nsv878296	chr4:942006-1019011	Bivalent Enhancer Enhancers Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
46	nsv878297	chr4:942006-1024752	Bivalent/Poised TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
47	esv1799097	chr4:944191-1053162	Flanking Bivalent TSS/Enh Weak transcription Active TSS Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
48	nsv878299	chr4:946974-1009420	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
49	nsv878298	chr4:946974-1011115	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
50	nsv878300	chr4:946974-1024752	Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:100 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:981600-987400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr4:981600-987600	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr4:981600-987600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr4:981600-988600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr4:981600-991000	Weak transcription	Right Atrium	heart
6	chr4:981600-991400	Weak transcription	Brain Substantia Nigra	brain
7	chr4:981800-986800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr4:981800-988800	Weak transcription	Small Intestine	intestine
9	chr4:981800-989000	Weak transcription	HSMMtube	muscle
10	chr4:981800-989600	Weak transcription	Primary B cells from cord blood	blood
11	chr4:981800-991200	Weak transcription	Left Ventricle	heart
12	chr4:982000-989200	Weak transcription	Primary B cells from peripheral blood	blood
13	chr4:982000-989200	Weak transcription	Fetal Thymus	thymus
14	chr4:982000-989200	Weak transcription	NH-A	brain
15	chr4:982000-989800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr4:982000-990800	Weak transcription	Primary hematopoietic stem cells	blood
17	chr4:982000-991600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
18	chr4:982200-986600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr4:982200-987200	Strong transcription	Fetal Brain Female	brain
20	chr4:982200-990600	Weak transcription	Primary T helper cells PMA-I stimulated	--
21	chr4:982200-991400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
22	chr4:982400-987800	Genic enhancers	Spleen	Spleen
23	chr4:982400-987800	Weak transcription	Osteobl	bone
24	chr4:982400-988800	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr4:982600-986600	Strong transcription	Fetal Stomach	stomach
26	chr4:982600-989200	Weak transcription	Colon Smooth Muscle	Colon
27	chr4:982800-986600	Strong transcription	Brain Germinal Matrix	brain
28	chr4:983000-986600	Strong transcription	Right Ventricle	heart
29	chr4:983200-986600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
30	chr4:983200-986800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr4:983400-986600	Strong transcription	Primary T cells from cord blood	blood
32	chr4:984400-990200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
33	chr4:984600-989400	Weak transcription	Monocytes-CD14+_RO01746	blood
34	chr4:984800-986800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
35	chr4:984800-989000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
36	chr4:984800-990800	Weak transcription	Brain Cingulate Gyrus	brain
37	chr4:985000-987800	Enhancers	Placenta	Placenta
38	chr4:985000-989000	Weak transcription	Primary T cells fromperipheralblood	blood
39	chr4:985000-990600	Weak transcription	Primary T helper cells fromperipheralblood	blood
40	chr4:985000-990600	Weak transcription	Brain Hippocampus Middle	brain
41	chr4:985200-988000	Enhancers	Stomach Mucosa	stomach
42	chr4:985200-990400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
43	chr4:985400-987600	Enhancers	Sigmoid Colon	Sigmoid Colon
44	chr4:985400-987800	Genic enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
45	chr4:985400-989800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
46	chr4:985400-990800	Weak transcription	Brain Angular Gyrus	brain
47	chr4:985600-986600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
48	chr4:985600-988600	Weak transcription	NHLF	lung
49	chr4:985600-990000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
50	chr4:985800-986600	Enhancers	Placenta Amnion	Placenta Amnion

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