Variant report

Variant rs28563898
Chromosome Location chr21:47604593-47604594
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47602800-47605600 Active TSS Brain Angular Gyrus brain
2 chr21:47603000-47605200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr21:47603000-47605200 Active TSS iPS-20b Cell Line embryonic stem cell
4 chr21:47603000-47605400 Active TSS iPS-18 Cell Line embryonic stem cell
5 chr21:47603200-47605000 Active TSS HUES64 Cell Line embryonic stem cell
6 chr21:47603200-47605200 Active TSS iPS-15b Cell Line embryonic stem cell
7 chr21:47603200-47605200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
8 chr21:47603200-47605200 Active TSS Brain Germinal Matrix brain
9 chr21:47603200-47605200 Active TSS Hela-S3 cervix
10 chr21:47603200-47605200 Active TSS HSMM muscle
11 chr21:47603200-47605400 Active TSS Rectal Smooth Muscle rectum
12 chr21:47603400-47605200 Active TSS H9 Cell Line embryonic stem cell
13 chr21:47603400-47605200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr21:47603400-47605200 Active TSS HUES6 Cell Line embryonic stem cell
15 chr21:47603400-47605400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
16 chr21:47603400-47605400 Active TSS Brain Cingulate Gyrus brain
17 chr21:47603400-47605600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr21:47603400-47605600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
19 chr21:47603400-47605600 Active TSS K562 blood
20 chr21:47603600-47605200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr21:47603600-47605200 Active TSS Fetal Adrenal Gland Adrenal Gland
22 chr21:47603800-47604600 Active TSS Left Ventricle heart
23 chr21:47603800-47604600 Transcr. at gene 5' and 3' Right Atrium heart
24 chr21:47603800-47604800 Active TSS Esophagus oesophagus
25 chr21:47603800-47604800 Active TSS HUVEC blood vessel
26 chr21:47603800-47604800 Bivalent/Poised TSS NHEK skin
27 chr21:47603800-47605000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr21:47603800-47605000 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
29 chr21:47603800-47605000 Active TSS Primary T helper 17 cells PMA-I stimulated --
30 chr21:47603800-47605000 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
31 chr21:47603800-47605000 Active TSS Colon Smooth Muscle Colon
32 chr21:47603800-47605000 Flanking Active TSS Placenta Placenta
33 chr21:47603800-47605200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr21:47603800-47605200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
35 chr21:47603800-47605200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
36 chr21:47603800-47605200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
37 chr21:47603800-47605200 Active TSS Fetal Intestine Small intestine
38 chr21:47603800-47605200 Active TSS NH-A brain
39 chr21:47603800-47605200 Active TSS Osteobl bone
40 chr21:47603800-47605400 Active TSS ES-I3 Cell Line embryonic stem cell
41 chr21:47603800-47605400 Active TSS H1 Cell Line embryonic stem cell
42 chr21:47603800-47605400 Active TSS HUES48 Cell Line embryonic stem cell
43 chr21:47603800-47605400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr21:47603800-47605400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
45 chr21:47603800-47605400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr21:47603800-47605400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
47 chr21:47603800-47605400 Active TSS Duodenum Smooth Muscle Duodenum
48 chr21:47603800-47605400 Active TSS Fetal Intestine Large intestine
49 chr21:47603800-47605400 Active TSS Thymus Thymus
50 chr21:47603800-47605400 Active TSS NHDF-Ad bronchial

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