Variant report

Variant	rs2858341
Chromosome Location	chr22:32949803-32949804
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12165523	1.00[EUR][1000 genomes]
rs12166091	1.00[EUR][1000 genomes]
rs2710360	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2710361	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2710372	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2710374	1.00[EUR][1000 genomes]
rs2710379	0.91[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2858340	1.00[EUR][1000 genomes]
rs2858342	1.00[EUR][1000 genomes]
rs9621479	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9621480	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9621482	1.00[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:32943200-32951200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr22:32943200-32959400	Weak transcription	Left Ventricle	heart
3	chr22:32943800-32951000	Weak transcription	Ovary	ovary
4	chr22:32943800-32951200	Weak transcription	Adipose Nuclei	Adipose
5	chr22:32943800-32951200	Weak transcription	Right Atrium	heart
6	chr22:32943800-32953200	Weak transcription	Spleen	Spleen
7	chr22:32948000-32951400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr22:32948800-32951000	Weak transcription	Small Intestine	intestine
9	chr22:32949000-32953200	Weak transcription	Colonic Mucosa	Colon
10	chr22:32949600-32950200	Enhancers	Lung	lung
11	chr22:32949800-32950000	Enhancers	A549	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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