Variant report

Variant rs28590272
Chromosome Location chr7:50360663-50360664
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:50355000-50367200 Weak transcription Spleen Spleen
2 chr7:50356200-50360800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr7:50356200-50367200 Weak transcription Duodenum Mucosa Duodenum
4 chr7:50356400-50360800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr7:50356400-50361600 Genic enhancers Primary hematopoietic stem cells short term culture blood
6 chr7:50356400-50364000 Genic enhancers Fetal Thymus thymus
7 chr7:50356400-50367200 Weak transcription Lung lung
8 chr7:50357800-50369400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr7:50358400-50360800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr7:50358400-50360800 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
11 chr7:50358400-50361600 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr7:50358400-50362400 Genic enhancers Primary B cells from peripheral blood blood
13 chr7:50358400-50369400 Strong transcription K562 blood
14 chr7:50358400-50369600 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr7:50358600-50360800 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
16 chr7:50358600-50362400 Genic enhancers Primary monocytes fromperipheralblood blood
17 chr7:50358800-50361000 Genic enhancers Primary T cells fromperipheralblood blood
18 chr7:50358800-50361200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr7:50358800-50364000 Genic enhancers GM12878-XiMat blood
20 chr7:50359000-50360800 Genic enhancers Primary T helper cells fromperipheralblood blood
21 chr7:50359600-50360800 Genic enhancers Primary T helper naive cells from peripheral blood blood
22 chr7:50359600-50364400 Strong transcription Dnd41 blood
23 chr7:50359600-50369400 Genic enhancers Primary T killer memory cells from peripheral blood blood
24 chr7:50359800-50360800 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr7:50359800-50360800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
26 chr7:50360200-50361000 Enhancers Primary hematopoietic stem cells blood
27 chr7:50360200-50361400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr7:50360200-50362400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
29 chr7:50360400-50360800 Transcr. at gene 5' and 3' Primary T helper memory cells from peripheral blood 2 blood
30 chr7:50360400-50361000 Genic enhancers Monocytes-CD14+_RO01746 blood
31 chr7:50360400-50362200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
32 chr7:50360400-50362400 Genic enhancers Primary B cells from cord blood blood
33 chr7:50360600-50360800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
34 chr7:50360600-50361000 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
35 chr7:50360600-50361000 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
36 chr7:50360600-50361400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
37 chr7:50360600-50361800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
38 chr7:50360600-50361800 Enhancers Thymus Thymus
39 chr7:50360600-50363000 Genic enhancers Primary neutrophils fromperipheralblood blood

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