Variant report

Variant rs28592856
Chromosome Location chr4:53888788-53888789
allele A/C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:53879400-53889600 Weak transcription Aorta Aorta
2 chr4:53879800-53890000 Weak transcription GM12878-XiMat blood
3 chr4:53880400-53891800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr4:53880800-53892800 Weak transcription Primary T cells from cord blood blood
5 chr4:53883200-53896400 Weak transcription Primary B cells from cord blood blood
6 chr4:53884400-53889600 Enhancers Ovary ovary
7 chr4:53885600-53888800 Enhancers NHDF-Ad bronchial
8 chr4:53886000-53888800 Enhancers NHLF lung
9 chr4:53886200-53891200 Enhancers Psoas Muscle Psoas
10 chr4:53886200-53892400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr4:53886400-53889200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr4:53886400-53892400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr4:53886600-53889400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr4:53886800-53890000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr4:53886800-53890200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr4:53887000-53888800 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr4:53887000-53889000 Weak transcription Pancreas Pancrea
18 chr4:53887000-53892400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr4:53887200-53892400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr4:53887600-53889400 Enhancers Colon Smooth Muscle Colon
21 chr4:53887800-53888800 Enhancers Fetal Kidney kidney
22 chr4:53887800-53889200 Enhancers HSMMtube muscle
23 chr4:53887800-53889600 Enhancers Fetal Heart heart
24 chr4:53888000-53888800 Enhancers Fetal Brain Female brain
25 chr4:53888000-53888800 Enhancers Fetal Muscle Leg muscle
26 chr4:53888000-53889400 Enhancers Adipose Nuclei Adipose
27 chr4:53888000-53889400 Enhancers Fetal Lung lung
28 chr4:53888000-53889400 Enhancers Stomach Smooth Muscle stomach
29 chr4:53888000-53890000 Enhancers Skeletal Muscle Male skeletal muscle
30 chr4:53888000-53890600 Enhancers Skeletal Muscle Female skeletal muscle
31 chr4:53888200-53889200 Enhancers Fetal Adrenal Gland Adrenal Gland
32 chr4:53888200-53889200 Enhancers Fetal Stomach stomach
33 chr4:53888400-53889000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
34 chr4:53888400-53889200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr4:53888400-53892400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr4:53888600-53889200 Enhancers Duodenum Smooth Muscle Duodenum
37 chr4:53888600-53889200 Enhancers Osteobl bone
38 chr4:53888600-53889600 Enhancers Rectal Smooth Muscle rectum

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