Variant report

Variant rs28609477
Chromosome Location chr4:1011123-1011124
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:1005000-1020200 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr4:1005200-1013600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr4:1006400-1011400 Weak transcription Fetal Lung lung
4 chr4:1006400-1018000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr4:1006400-1018200 Weak transcription NHLF lung
6 chr4:1006400-1019000 Weak transcription HMEC breast
7 chr4:1006600-1013200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr4:1006600-1017600 Weak transcription Aorta Aorta
9 chr4:1006600-1027600 Weak transcription Right Atrium heart
10 chr4:1006800-1011200 Weak transcription Right Ventricle heart
11 chr4:1006800-1012000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr4:1006800-1012800 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr4:1006800-1012800 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr4:1006800-1014200 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr4:1006800-1015200 Weak transcription Duodenum Mucosa Duodenum
16 chr4:1006800-1015200 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr4:1006800-1015800 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr4:1006800-1017600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr4:1006800-1018200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr4:1006800-1018200 Weak transcription Muscle Satellite Cultured Cells --
21 chr4:1006800-1018200 Weak transcription Esophagus oesophagus
22 chr4:1006800-1018200 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr4:1006800-1018400 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr4:1006800-1018800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr4:1006800-1019400 Weak transcription Osteobl bone
26 chr4:1007000-1012800 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr4:1007000-1013200 Weak transcription A549 lung
28 chr4:1007000-1013800 Weak transcription Primary B cells from peripheral blood blood
29 chr4:1007000-1018400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr4:1007000-1019200 Weak transcription Fetal Heart heart
31 chr4:1007000-1019800 Weak transcription Hela-S3 cervix
32 chr4:1007200-1011600 Enhancers Brain Substantia Nigra brain
33 chr4:1007200-1012800 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr4:1007200-1018200 Weak transcription K562 blood
35 chr4:1007400-1017400 Weak transcription Lung lung
36 chr4:1007600-1011600 Enhancers Brain Angular Gyrus brain
37 chr4:1007600-1011600 Weak transcription Gastric stomach
38 chr4:1007600-1012200 Weak transcription Stomach Mucosa stomach
39 chr4:1007600-1013000 Weak transcription Primary T cells fromperipheralblood blood
40 chr4:1007800-1011800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr4:1007800-1013000 Weak transcription H1 Cell Line embryonic stem cell
42 chr4:1007800-1018600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr4:1008000-1011200 Weak transcription Ovary ovary
44 chr4:1008000-1012200 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr4:1008000-1016200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr4:1008200-1011400 Enhancers Breast Myoepithelial Primary Cells Breast
47 chr4:1008200-1013400 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr4:1008200-1019200 Weak transcription Fetal Kidney kidney
49 chr4:1008400-1013600 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr4:1008400-1015800 Weak transcription Liver Liver

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