Variant report

Variant rs28612798
Chromosome Location chr4:952539-952540
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:927000-965800 Weak transcription HSMMtube muscle
2 chr4:927600-955000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr4:933800-965600 Weak transcription HSMM muscle
4 chr4:939400-960800 Weak transcription H9 Cell Line embryonic stem cell
5 chr4:939600-953600 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr4:939800-955600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr4:939800-958400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr4:940000-956600 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr4:940000-957200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr4:941400-959400 Strong transcription Fetal Stomach stomach
11 chr4:941800-955200 Weak transcription NHEK skin
12 chr4:942600-955400 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr4:943800-955600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr4:944000-953000 Strong transcription Primary monocytes fromperipheralblood blood
15 chr4:944200-953600 Weak transcription Stomach Mucosa stomach
16 chr4:944200-964000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
17 chr4:944800-953400 Strong transcription Fetal Adrenal Gland Adrenal Gland
18 chr4:945000-956800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr4:945000-957200 Strong transcription Brain Germinal Matrix brain
20 chr4:945000-961000 Strong transcription Adipose Nuclei Adipose
21 chr4:945000-961200 Strong transcription Fetal Intestine Small intestine
22 chr4:945200-961200 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr4:945200-962800 Strong transcription Lung lung
24 chr4:945400-965200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr4:945600-964400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr4:945800-952800 Strong transcription Brain Inferior Temporal Lobe brain
27 chr4:945800-957200 Strong transcription Gastric stomach
28 chr4:946000-959600 Weak transcription H1 Cell Line embryonic stem cell
29 chr4:946400-960600 Strong transcription Primary T cells from cord blood blood
30 chr4:946600-963800 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr4:946800-952800 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr4:947000-961000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr4:947200-966000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr4:948400-953200 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr4:948400-961000 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr4:949000-954800 Strong transcription Esophagus oesophagus
37 chr4:949200-952800 Weak transcription Placenta Placenta
38 chr4:949200-957400 Strong transcription Pancreas Pancrea
39 chr4:949200-959200 Weak transcription Psoas Muscle Psoas
40 chr4:949200-961200 Weak transcription Fetal Lung lung
41 chr4:949200-961400 Weak transcription Primary hematopoietic stem cells blood
42 chr4:949400-952600 Weak transcription Brain Angular Gyrus brain
43 chr4:949600-954800 Weak transcription Colon Smooth Muscle Colon
44 chr4:949600-955000 Strong transcription Colonic Mucosa Colon
45 chr4:950000-955400 Weak transcription Brain Cingulate Gyrus brain
46 chr4:950000-965800 Weak transcription Left Ventricle heart
47 chr4:950400-953400 Weak transcription Ovary ovary
48 chr4:950400-960600 Strong transcription Spleen Spleen
49 chr4:950600-952600 Strong transcription Osteobl bone
50 chr4:950800-953200 Strong transcription Liver Liver

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