Variant report

Variant	rs28613686
Chromosome Location	chr3:35084209-35084210
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs13315510	0.87[AFR][1000 genomes]
rs2169884	0.84[AFR][1000 genomes]
rs9865378	0.96[AFR][1000 genomes]
rs9883829	0.80[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834656	chr3:35006198-35156132	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:35083200-35085200	Enhancers	Liver	Liver
2	chr3:35083600-35086000	Enhancers	Fetal Intestine Large	intestine
3	chr3:35083600-35086200	Enhancers	Fetal Intestine Small	intestine
4	chr3:35084000-35084400	Enhancers	Psoas Muscle	Psoas
5	chr3:35084000-35084400	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
6	chr3:35084000-35085400	Enhancers	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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