The 2.0 version of rSNPBase

Variant report

Variant rs28636983
Chromosome Location chr4:3396429-3396430
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:3389200-3403400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr4:3390000-3404600 Weak transcription Left Ventricle heart
3 chr4:3390000-3417200 Weak transcription Gastric stomach
4 chr4:3390200-3398600 Weak transcription Brain Angular Gyrus brain
5 chr4:3391000-3398000 Weak transcription Fetal Brain Female brain
6 chr4:3391000-3404600 Weak transcription Aorta Aorta
7 chr4:3391000-3414000 Weak transcription Primary T cells from cord blood blood
8 chr4:3391200-3396800 Weak transcription NHLF lung
9 chr4:3391200-3398800 Weak transcription Right Atrium heart
10 chr4:3391400-3407400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr4:3391400-3408800 Weak transcription Ovary ovary
12 chr4:3391600-3397800 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr4:3391600-3399200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr4:3391600-3404000 Weak transcription HSMMtube muscle
15 chr4:3391600-3407800 Weak transcription Brain Cingulate Gyrus brain
16 chr4:3391800-3398000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr4:3391800-3401400 Weak transcription Liver Liver
18 chr4:3391800-3403000 Weak transcription HMEC breast
19 chr4:3391800-3403400 Weak transcription Muscle Satellite Cultured Cells --
20 chr4:3391800-3424200 Weak transcription Colonic Mucosa Colon
21 chr4:3392000-3396800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr4:3392000-3398000 Weak transcription Fetal Lung lung
23 chr4:3392000-3417200 Weak transcription Pancreas Pancrea
24 chr4:3392200-3397000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr4:3392400-3397800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr4:3392400-3403200 Weak transcription Fetal Intestine Small intestine
27 chr4:3392400-3409800 Weak transcription Spleen Spleen
28 chr4:3392600-3398800 Weak transcription Esophagus oesophagus
29 chr4:3392600-3404200 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr4:3393400-3405400 Weak transcription Brain Germinal Matrix brain
31 chr4:3393600-3398000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr4:3393800-3405600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr4:3394400-3396800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr4:3394600-3405400 Weak transcription Fetal Muscle Leg muscle
35 chr4:3395000-3396600 Strong transcription NHEK skin
36 chr4:3395000-3399000 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr4:3395000-3403200 Weak transcription HSMM muscle
38 chr4:3395200-3400000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr4:3395400-3397000 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr4:3395600-3397200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr4:3395800-3403200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr4:3395800-3403600 Weak transcription Lung lung
43 chr4:3395800-3406000 Weak transcription HepG2 liver
44 chr4:3396000-3398800 Weak transcription Fetal Stomach stomach
45 chr4:3396000-3406000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr4:3396400-3403400 Weak transcription Fetal Muscle Trunk muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015