Variant report

Variant	rs28645155
Chromosome Location	chr14:70888717-70888718
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10143477	1.00[AMR][1000 genomes]
rs10147533	1.00[AMR][1000 genomes]
rs12164886	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28433416	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28470961	1.00[AMR][1000 genomes]
rs28493847	1.00[AMR][1000 genomes]
rs28521314	1.00[AMR][1000 genomes]
rs28544483	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28662986	1.00[AMR][1000 genomes]
rs28816236	1.00[AMR][1000 genomes]
rs28824571	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28842843	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902075	chr14:70612618-70919016	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	esv3523741	chr14:70888699-70893997	Weak transcription Enhancers ZNF genes & repeats	TF binding region lncRNA	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70884000-70889000	Weak transcription	Fetal Muscle Leg	muscle
2	chr14:70888600-70889800	Enhancers	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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