Variant report

Variant rs28646024
Chromosome Location chr15:31010546-31010547
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:30919600-31023200 Weak transcription Fetal Intestine Small intestine
2 chr15:30920000-31028200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr15:30953000-31011600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr15:30960200-31011600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr15:30963000-31022600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr15:30969200-31011800 Weak transcription A549 lung
7 chr15:30969600-31014400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr15:30973000-31010800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr15:30975200-31011600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr15:30975800-31011600 Weak transcription Thymus Thymus
11 chr15:30989000-31011000 Weak transcription Fetal Thymus thymus
12 chr15:30989000-31028200 Weak transcription H9 Cell Line embryonic stem cell
13 chr15:30994600-31028000 Weak transcription Fetal Muscle Trunk muscle
14 chr15:30996400-31039400 Weak transcription HepG2 liver
15 chr15:31003400-31015600 Weak transcription GM12878-XiMat blood
16 chr15:31006600-31011000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr15:31006800-31029200 Weak transcription Gastric stomach
18 chr15:31007000-31013000 Strong transcription Dnd41 blood
19 chr15:31007000-31052200 Weak transcription Duodenum Mucosa Duodenum
20 chr15:31007800-31011200 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr15:31007800-31022800 Weak transcription Primary hematopoietic stem cells blood
22 chr15:31007800-31060000 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr15:31008000-31012800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr15:31008000-31016200 Strong transcription Monocytes-CD14+_RO01746 blood
25 chr15:31008200-31015400 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr15:31008400-31023200 Weak transcription K562 blood
27 chr15:31008600-31020000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr15:31008800-31015400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr15:31008800-31062600 Weak transcription NHLF lung
30 chr15:31009000-31029200 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr15:31009000-31034600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr15:31009000-31054800 Weak transcription Fetal Lung lung
33 chr15:31009200-31011200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr15:31009200-31012000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr15:31009200-31012800 Strong transcription HUES64 Cell Line embryonic stem cell
36 chr15:31009200-31013000 Strong transcription Primary neutrophils fromperipheralblood blood
37 chr15:31009200-31018400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr15:31009200-31024000 Weak transcription NHEK skin
39 chr15:31009400-31012200 Strong transcription Primary monocytes fromperipheralblood blood
40 chr15:31009400-31029200 Weak transcription Hela-S3 cervix
41 chr15:31009600-31012400 Strong transcription Fetal Stomach stomach
42 chr15:31009600-31052000 Weak transcription HUVEC blood vessel
43 chr15:31009800-31012000 Strong transcription HUES6 Cell Line embryonic stem cell
44 chr15:31009800-31012200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr15:31009800-31029000 Weak transcription Primary T cells from cord blood blood
46 chr15:31009800-31036800 Weak transcription Fetal Muscle Leg muscle
47 chr15:31010000-31011600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr15:31010000-31027800 Weak transcription Fetal Intestine Large intestine
49 chr15:31010000-31028400 Weak transcription H1 Cell Line embryonic stem cell
50 chr15:31010000-31028400 Weak transcription iPS-15b Cell Line embryonic stem cell

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