Variant report

Variant rs28664081
Chromosome Location chr7:5631225-5631226
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5621000-5631600 Weak transcription Pancreas Pancrea
2 chr7:5621200-5631400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr7:5626200-5631600 Weak transcription Brain Angular Gyrus brain
4 chr7:5629400-5631600 Enhancers Brain Substantia Nigra brain
5 chr7:5629400-5632400 Enhancers Primary hematopoietic stem cells blood
6 chr7:5629600-5631600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr7:5629600-5631600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
8 chr7:5629600-5632000 Bivalent Enhancer Fetal Muscle Trunk muscle
9 chr7:5629800-5632400 Enhancers Spleen Spleen
10 chr7:5630000-5631600 Weak transcription Esophagus oesophagus
11 chr7:5630200-5631600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
12 chr7:5630200-5631800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr7:5630400-5633200 Enhancers Fetal Heart heart
14 chr7:5630600-5631400 Enhancers Muscle Satellite Cultured Cells --
15 chr7:5630600-5631600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
16 chr7:5630600-5632400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
17 chr7:5630800-5631600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr7:5630800-5631600 Enhancers GM12878-XiMat blood
19 chr7:5630800-5631600 Enhancers HMEC breast
20 chr7:5630800-5631800 Enhancers Primary hematopoietic stem cells short term culture blood
21 chr7:5630800-5631800 Enhancers HUVEC blood vessel
22 chr7:5630800-5632000 Enhancers NHDF-Ad bronchial
23 chr7:5631000-5631600 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
24 chr7:5631000-5631600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr7:5631000-5631600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
26 chr7:5631000-5631600 Enhancers Brain Cingulate Gyrus brain
27 chr7:5631000-5631600 Flanking Active TSS HepG2 liver
28 chr7:5631000-5631800 Enhancers ES-WA7 Cell Line embryonic stem cell
29 chr7:5631000-5631800 Bivalent Enhancer H1 Cell Line embryonic stem cell
30 chr7:5631000-5631800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
31 chr7:5631000-5631800 Enhancers HSMMtube muscle
32 chr7:5631000-5631800 Enhancers NHLF lung
33 chr7:5631000-5632000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
34 chr7:5631000-5632000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr7:5631000-5632000 Bivalent Enhancer Fetal Stomach stomach
36 chr7:5631000-5632000 Enhancers Left Ventricle heart
37 chr7:5631000-5632000 Enhancers Ovary ovary
38 chr7:5631000-5632200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
39 chr7:5631000-5632200 Flanking Active TSS A549 lung
40 chr7:5631000-5632200 Flanking Active TSS Hela-S3 cervix
41 chr7:5631000-5632200 Flanking Active TSS HSMM muscle
42 chr7:5631000-5632400 Bivalent Enhancer Primary B cells from peripheral blood blood
43 chr7:5631000-5632400 Enhancers Lung lung
44 chr7:5631200-5631400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
45 chr7:5631200-5631400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr7:5631200-5631400 Flanking Active TSS Fetal Muscle Leg muscle
47 chr7:5631200-5631600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr7:5631200-5631600 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr7:5631200-5631600 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
50 chr7:5631200-5631600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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