Variant report

Variant	rs28674632
Chromosome Location	chr1:212024629-212024630
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs12118567	0.88[CHB][hapmap];1.00[YRI][hapmap]
rs12121937	0.86[CHB][hapmap]
rs12127709	0.88[CHB][hapmap];1.00[YRI][hapmap]
rs12129884	0.88[CHB][hapmap];1.00[YRI][hapmap]
rs12129898	0.88[CHB][hapmap];1.00[YRI][hapmap]
rs12143191	0.88[CHB][hapmap]
rs12144899	0.86[CHB][hapmap];1.00[YRI][hapmap]
rs17018373	0.86[CHB][hapmap];1.00[YRI][hapmap]
rs28432809	0.96[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs28668719	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3292	0.88[CHB][hapmap];1.00[YRI][hapmap]
rs4339923	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7534669	0.86[CHB][hapmap]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs28674632	CD55	cis	parietal	SCAN

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:212016800-212027000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr1:212024400-212025200	Enhancers	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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